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About the AIND Lightsheet Challenge Dataset


Tutorial Description

In this tutorial, we will share information about lightsheet microscopy data collected at the Allen Institute for Neural Dynamics and how to run a reproducible reference registration pipeline in CodeOcean.

Duration: 0.5 hours.

Learning Outcomes

  1. Understand how the AIND lightsheet volumes are created.
  2. Learn about driving neurophysiological problems.
  3. Identify challenges for registration of the dataset.
  4. Learn how to run a reference registration pipeline on the dataset in CodeOcean.

Approach and Materials

Background and References

-AIND Data Schema