itkBinaryImageToLabelMapFilter.h

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/*=========================================================================
 *
 *  Copyright NumFOCUS
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         https://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef itkBinaryImageToLabelMapFilter_h
#define itkBinaryImageToLabelMapFilter_h
 
#include "itkScanlineFilterCommon.h"
#include "itkLabelMap.h"
#include "itkLabelObject.h"
 
namespace itk
{
 
template <typename TInputImage,
          typename TOutputImage = LabelMap<LabelObject<SizeValueType, TInputImage::ImageDimension>>>
class ITK_TEMPLATE_EXPORT BinaryImageToLabelMapFilter
  : public ImageToImageFilter<TInputImage, TOutputImage>
  , protected ScanlineFilterCommon<TInputImage, TOutputImage>
{
public:
  ITK_DISALLOW_COPY_AND_MOVE(BinaryImageToLabelMapFilter);

  using Self = BinaryImageToLabelMapFilter;
  using Superclass = ImageToImageFilter<TInputImage, TOutputImage>;
  using Pointer = SmartPointer<Self>;
  using ConstPointer = SmartPointer<const Self>;
  using Superclass::Register;
  using Superclass::UnRegister;

  itkNewMacro(Self);

  itkOverrideGetNameOfClassMacro(BinaryImageToLabelMapFilter);

  using typename Superclass::InputImagePointer;

  using OutputPixelType = typename TOutputImage::PixelType;
  using InputPixelType = typename TInputImage::PixelType;
  using SizeValueType = typename TInputImage::SizeValueType;
  using OffsetValueType = typename TInputImage::OffsetValueType;
  static constexpr unsigned int ImageDimension = TOutputImage::ImageDimension;
  static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension;
  static constexpr unsigned int InputImageDimension = TInputImage::ImageDimension;

  using InputImageType = TInputImage;
  using IndexType = typename TInputImage::IndexType;
  using SizeType = typename TInputImage::SizeType;
  using OffsetType = typename TInputImage::OffsetType;
 
  using OutputImageType = TOutputImage;
  using RegionType = typename TOutputImage::RegionType;
  using OutputIndexType = typename TOutputImage::IndexType;
  using OutputSizeType = typename TOutputImage::SizeType;
  using OutputOffsetType = typename TOutputImage::OffsetType;
  using OutputImagePixelType = typename TOutputImage::PixelType;

  itkSetMacro(FullyConnected, bool);
  itkGetConstReferenceMacro(FullyConnected, bool);
  itkBooleanMacro(FullyConnected);
 
  // only set after completion
  itkGetConstReferenceMacro(NumberOfObjects, SizeValueType);

  itkSetMacro(OutputBackgroundValue, OutputPixelType);
  itkGetConstMacro(OutputBackgroundValue, OutputPixelType);

  itkSetMacro(InputForegroundValue, InputPixelType);
  itkGetConstMacro(InputForegroundValue, InputPixelType);
 
protected:
  BinaryImageToLabelMapFilter();
  ~BinaryImageToLabelMapFilter() override = default;
  void
  PrintSelf(std::ostream & os, Indent indent) const override;
 
  void
  DynamicThreadedGenerateData(const RegionType & outputRegionForThread) override;
 
  void
  GenerateData() override;

  void
  GenerateInputRequestedRegion() override;

  void
  EnlargeOutputRequestedRegion(DataObject * itkNotUsed(output)) override;
 
  using ScanlineFunctions = ScanlineFilterCommon<TInputImage, TOutputImage>;
 
  using InternalLabelType = typename ScanlineFunctions::InternalLabelType;
  using OutSizeType = typename ScanlineFunctions::OutSizeType;
  using RunLength = typename ScanlineFunctions::RunLength;
  using LineEncodingType = typename ScanlineFunctions::LineEncodingType;
  using LineEncodingIterator = typename ScanlineFunctions::LineEncodingIterator;
  using LineEncodingConstIterator = typename ScanlineFunctions::LineEncodingConstIterator;
  using OffsetVectorType = typename ScanlineFunctions::OffsetVectorType;
  using OffsetVectorConstIterator = typename ScanlineFunctions::OffsetVectorConstIterator;
  using LineMapType = typename ScanlineFunctions::LineMapType;
  using UnionFindType = typename ScanlineFunctions::UnionFindType;
  using ConsecutiveVectorType = typename ScanlineFunctions::ConsecutiveVectorType;
  using WorkUnitData = typename ScanlineFunctions::WorkUnitData;
 
private:
  OutputPixelType m_OutputBackgroundValue{};
  InputPixelType  m_InputForegroundValue{};
  SizeValueType   m_NumberOfObjects{};
};
} // end namespace itk
 
#ifndef ITK_MANUAL_INSTANTIATION
#  if !defined(ITK_WRAPPING_PARSER)
#    include "itkBinaryImageToLabelMapFilter.hxx"
#  endif
#endif
 
#endif