itkShapePriorMAPCostFunctionBase.h

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/*=========================================================================
 *
 *  Copyright NumFOCUS
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         https://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef itkShapePriorMAPCostFunctionBase_h
#define itkShapePriorMAPCostFunctionBase_h
 
#include "itkSingleValuedCostFunction.h"
#include "itkLevelSet.h"
#include "itkShapeSignedDistanceFunction.h"
 
namespace itk
{
template <typename TFeatureImage, typename TOutputPixel>
class ITK_TEMPLATE_EXPORT ShapePriorMAPCostFunctionBase : public SingleValuedCostFunction
{
public:
  ITK_DISALLOW_COPY_AND_MOVE(ShapePriorMAPCostFunctionBase);

  using Self = ShapePriorMAPCostFunctionBase;
  using Superclass = SingleValuedCostFunction;
  using Pointer = SmartPointer<Self>;
  using ConstPointer = SmartPointer<const Self>;

  itkOverrideGetNameOfClassMacro(ShapePriorMAPCostFunctionBase);

  using typename Superclass::MeasureType;

  using typename Superclass::DerivativeType;

  using typename Superclass::ParametersType;

  using FeatureImageType = TFeatureImage;
  using FeatureImagePointer = typename FeatureImageType::ConstPointer;

  static constexpr unsigned int ImageDimension = TFeatureImage::ImageDimension;

  using PixelType = TOutputPixel;

  using NodeType = LevelSetNode<PixelType, Self::ImageDimension>;

  using NodeContainerType = VectorContainer<unsigned int, NodeType>;
  using NodeContainerPointer = typename NodeContainerType::ConstPointer;

  using ShapeFunctionType = ShapeSignedDistanceFunction<double, Self::ImageDimension>;
  using ShapeFunctionPointer = typename ShapeFunctionType::Pointer;

  itkSetObjectMacro(ShapeFunction, ShapeFunctionType);
  itkGetModifiableObjectMacro(ShapeFunction, ShapeFunctionType);
  itkSetConstObjectMacro(ActiveRegion, NodeContainerType);
  itkGetConstObjectMacro(ActiveRegion, NodeContainerType);
  itkSetConstObjectMacro(FeatureImage, FeatureImageType);
  itkGetConstObjectMacro(FeatureImage, FeatureImageType);
  MeasureType
  GetValue(const ParametersType & parameters) const override;

  void
  GetDerivative(const ParametersType &, DerivativeType &) const override
  {
    itkExceptionStringMacro("This function is currently not supported.");
  }

  unsigned int
  GetNumberOfParameters() const override
  {
    return m_ShapeFunction->GetNumberOfParameters();
  }

  virtual MeasureType
  ComputeLogInsideTerm(const ParametersType &) const = 0;

  virtual MeasureType
  ComputeLogGradientTerm(const ParametersType &) const = 0;

  virtual MeasureType
  ComputeLogShapePriorTerm(const ParametersType &) const = 0;

  virtual MeasureType
  ComputeLogPosePriorTerm(const ParametersType &) const = 0;

  virtual void
  Initialize();
 
protected:
  ShapePriorMAPCostFunctionBase();
  ~ShapePriorMAPCostFunctionBase() override = default;
 
  void
  PrintSelf(std::ostream & os, Indent indent) const override;
 
  ShapeFunctionPointer m_ShapeFunction{};
  NodeContainerPointer m_ActiveRegion{};
 
  FeatureImagePointer m_FeatureImage{};
};
} // end namespace itk
 
#ifndef ITK_MANUAL_INSTANTIATION
#  include "itkShapePriorMAPCostFunctionBase.hxx"
#endif
 
#endif