#include <itkAutoCropLabelMapFilter.h>
Crop a LabelMap image to fit exactly the objects in the LabelMap.
The CropBorder can be used to add a border which will never be larger than the input image. To add a border of size independent of the input image, PadLabelMapFilter can be used.
This implementation was taken from the Insight Journal paper: https://doi.org/10.54294/q6auw4
Definition at line 53 of file itkAutoCropLabelMapFilter.h.
Public Types | |
using | ConstPointer = SmartPointer<const Self> |
using | IndexType = typename InputImageType::IndexType |
using | InputImageConstPointer = typename InputImageType::ConstPointer |
using | InputImagePixelType = typename InputImageType::PixelType |
using | InputImagePointer = typename InputImageType::Pointer |
using | InputImageRegionType = typename InputImageType::RegionType |
using | InputImageType = TInputImage |
using | LabelObjectType = typename InputImageType::LabelObjectType |
using | PixelType = typename InputImageType::PixelType |
using | Pointer = SmartPointer<Self> |
using | RegionType = typename InputImageType::RegionType |
using | Self = AutoCropLabelMapFilter |
using | SizeType = typename InputImageType::SizeType |
using | Superclass = ChangeRegionLabelMapFilter<TInputImage> |
using | TOutputImage = TInputImage |
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using | ConstPointer = SmartPointer<const Self> |
using | IndexType = typename InputImageType::IndexType |
using | IndexValueType = typename InputImageType::IndexValueType |
using | InputImageConstPointer = typename InputImageType::ConstPointer |
using | InputImagePixelType = typename InputImageType::PixelType |
using | InputImagePointer = typename InputImageType::Pointer |
using | InputImageRegionType = typename InputImageType::RegionType |
using | InputImageType = TInputImage |
using | LabelObjectType = typename InputImageType::LabelObjectType |
using | PixelType = typename InputImageType::PixelType |
using | Pointer = SmartPointer<Self> |
using | RegionType = typename InputImageType::RegionType |
using | Self = ChangeRegionLabelMapFilter |
using | SizeType = typename InputImageType::SizeType |
using | Superclass = InPlaceLabelMapFilter<TInputImage> |
using | TOutputImage = TInputImage |
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using | ConstPointer = SmartPointer<const Self> |
using | IndexType = typename InputImageType::IndexType |
using | InputImageConstPointer = typename InputImageType::ConstPointer |
using | InputImagePixelType = typename InputImageType::PixelType |
using | InputImagePointer = typename InputImageType::Pointer |
using | InputImageRegionType = typename InputImageType::RegionType |
using | InputImageType = TInputImage |
using | LabelObjectType = typename InputImageType::LabelObjectType |
using | OutputImagePixelType |
using | OutputImagePointer |
using | OutputImageRegionType |
using | OutputImageType |
using | PixelType = typename InputImageType::PixelType |
using | Pointer = SmartPointer<Self> |
using | RegionType = typename InputImageType::RegionType |
using | Self = InPlaceLabelMapFilter |
using | Superclass = LabelMapFilter<TInputImage, TInputImage> |
using | TOutputImage = TInputImage |
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using | ConstPointer |
using | ConstPointer |
typedef typename InputImageType::ConstPointer | InputImageConstPointer |
using | InputImageConstPointer |
typedef typename InputImageType::PixelType | InputImagePixelType |
using | InputImagePixelType |
typedef typename InputImageType::Pointer | InputImagePointer |
using | InputImagePointer |
typedef typename InputImageType::RegionType | InputImageRegionType |
using | InputImageRegionType |
typedef TInputImage | InputImageType |
using | InputImageType |
using | LabelObjectType |
using | LabelObjectType |
using | OutputImageConstPointer |
using | OutputImageConstPointer |
using | OutputImagePixelType |
using | OutputImagePixelType |
using | OutputImagePointer |
using | OutputImagePointer |
using | OutputImageRegionType |
using | OutputImageRegionType |
using | OutputImageType |
using | OutputImageType |
using | Pointer |
using | Pointer |
using | Self |
using | Self |
using | Superclass |
using | Superclass |
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using | ConstPointer |
using | InputImageConstPointer |
using | InputImagePixelType |
using | InputImagePointer |
using | InputImageRegionType |
using | InputImageType |
typedef typename OutputImageType::PixelType | OutputImagePixelType |
using | OutputImagePixelType |
typedef typename OutputImageType::RegionType | OutputImageRegionType |
using | OutputImageRegionType |
using | Pointer |
using | Self |
using | Superclass |
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using | ConstPointer |
using | DataObjectIdentifierType |
using | DataObjectPointer |
using | DataObjectPointerArraySizeType |
using | OutputImagePixelType |
using | OutputImagePointer |
using | OutputImageRegionType |
using | OutputImageType |
using | Pointer |
using | Self |
using | Superclass |
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using | ConstPointer = SmartPointer<const Self> |
using | DataObjectIdentifierType = DataObject::DataObjectIdentifierType |
using | DataObjectPointer = DataObject::Pointer |
using | DataObjectPointerArray = std::vector<DataObjectPointer> |
using | DataObjectPointerArraySizeType = DataObjectPointerArray::size_type |
using | MultiThreaderType = MultiThreaderBase |
using | NameArray = std::vector<DataObjectIdentifierType> |
using | Pointer = SmartPointer<Self> |
using | Self = ProcessObject |
using | Superclass = Object |
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using | ConstPointer = SmartPointer<const Self> |
using | Pointer = SmartPointer<Self> |
using | Self = Object |
using | Superclass = LightObject |
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using | ConstPointer = SmartPointer<const Self> |
using | Pointer = SmartPointer<Self> |
using | Self = LightObject |
Public Member Functions | |
virtual::itk::LightObject::Pointer | CreateAnother () const |
const char * | GetNameOfClass () const override |
virtual void | SetCropBorder (SizeType _arg) |
virtual const SizeType & | GetCropBorder () const |
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virtual::itk::LightObject::Pointer | CreateAnother () const |
const char * | GetNameOfClass () const override |
virtual void | SetRegion (OutputImageRegionType _arg) |
virtual const OutputImageRegionType & | GetRegion () const |
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bool | CanRunInPlace () const |
virtual::itk::LightObject::Pointer | CreateAnother () const |
const char * | GetNameOfClass () const override |
virtual void | SetInPlace (bool _arg) |
virtual bool | GetInPlace () |
virtual void | InPlaceOn () |
virtual void | InPlaceOff () |
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virtual::itk::LightObject::Pointer | CreateAnother () const |
virtual::itk::LightObject::Pointer | CreateAnother () const |
void | EnlargeOutputRequestedRegion (DataObject *output) override |
void | EnlargeOutputRequestedRegion (DataObject *output) override |
void | GenerateInputRequestedRegion () override |
void | GenerateInputRequestedRegion () override |
const char * | GetNameOfClass () const override |
const char * | GetNameOfClass () const override |
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const InputImageType * | GetInput () const |
const InputImageType * | GetInput () const |
const InputImageType * | GetInput (unsigned int idx) const |
const InputImageType * | GetInput (unsigned int idx) const |
void | PopBackInput () override |
void | PopBackInput () override |
void | PopFrontInput () override |
void | PopFrontInput () override |
virtual void | PushBackInput (const InputImageType *input) |
virtual void | PushBackInput (const InputImageType *input) |
virtual void | PushFrontInput (const InputImageType *input) |
virtual void | PushFrontInput (const InputImageType *input) |
virtual void | SetInput (const InputImageType *input) |
virtual void | SetInput (const InputImageType *input) |
virtual void | SetInput (unsigned int, const TInputImage *image) |
virtual void | SetInput (unsigned int, const TInputImage *image) |
virtual void | SetCoordinateTolerance (double _arg) |
virtual double | GetCoordinateTolerance () const |
virtual void | SetCoordinateTolerance (double _arg) |
virtual double | GetCoordinateTolerance () const |
virtual void | SetDirectionTolerance (double _arg) |
virtual double | GetDirectionTolerance () const |
virtual void | SetDirectionTolerance (double _arg) |
virtual double | GetDirectionTolerance () const |
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OutputImageType * | GetOutput (unsigned int idx) |
OutputImageType * | GetOutput () |
const OutputImageType * | GetOutput () const |
virtual void | GraftOutput (DataObject *graft) |
virtual void | GraftOutput (const DataObjectIdentifierType &key, DataObject *graft) |
virtual void | GraftNthOutput (unsigned int idx, DataObject *graft) |
ProcessObject::DataObjectPointer | MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override |
ProcessObject::DataObjectPointer | MakeOutput (const ProcessObject::DataObjectIdentifierType &) override |
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virtual void | AbortGenerateDataOff () |
virtual void | AbortGenerateDataOn () |
virtual const bool & | GetAbortGenerateData () const |
DataObjectPointerArray | GetIndexedInputs () |
DataObjectPointerArray | GetIndexedOutputs () |
NameArray | GetInputNames () const |
DataObjectPointerArray | GetInputs () |
MultiThreaderType * | GetMultiThreader () const |
const char * | GetNameOfClass () const override |
DataObjectPointerArraySizeType | GetNumberOfIndexedInputs () const |
DataObjectPointerArraySizeType | GetNumberOfIndexedOutputs () const |
DataObjectPointerArraySizeType | GetNumberOfInputs () const |
DataObjectPointerArraySizeType | GetNumberOfOutputs () const |
virtual DataObjectPointerArraySizeType | GetNumberOfValidRequiredInputs () const |
NameArray | GetOutputNames () const |
DataObjectPointerArray | GetOutputs () |
virtual float | GetProgress () const |
NameArray | GetRequiredInputNames () const |
bool | HasInput (const DataObjectIdentifierType &key) const |
bool | HasOutput (const DataObjectIdentifierType &key) const |
void | IncrementProgress (float increment) |
virtual void | PrepareOutputs () |
virtual void | PropagateRequestedRegion (DataObject *output) |
virtual void | ResetPipeline () |
virtual void | SetAbortGenerateData (bool _arg) |
void | SetMultiThreader (MultiThreaderType *threader) |
virtual void | Update () |
virtual void | UpdateLargestPossibleRegion () |
virtual void | UpdateOutputData (DataObject *output) |
virtual void | UpdateOutputInformation () |
void | UpdateProgress (float progress) |
virtual void | SetReleaseDataFlag (bool val) |
virtual bool | GetReleaseDataFlag () const |
void | ReleaseDataFlagOn () |
void | ReleaseDataFlagOff () |
virtual void | SetReleaseDataBeforeUpdateFlag (bool _arg) |
virtual const bool & | GetReleaseDataBeforeUpdateFlag () const |
virtual void | ReleaseDataBeforeUpdateFlagOn () |
virtual void | ReleaseDataBeforeUpdateFlagOff () |
virtual void | SetNumberOfWorkUnits (ThreadIdType _arg) |
virtual const ThreadIdType & | GetNumberOfWorkUnits () const |
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unsigned long | AddObserver (const EventObject &event, Command *cmd) const |
unsigned long | AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const |
LightObject::Pointer | CreateAnother () const override |
virtual void | DebugOff () const |
virtual void | DebugOn () const |
Command * | GetCommand (unsigned long tag) |
bool | GetDebug () const |
MetaDataDictionary & | GetMetaDataDictionary () |
const MetaDataDictionary & | GetMetaDataDictionary () const |
virtual ModifiedTimeType | GetMTime () const |
virtual const TimeStamp & | GetTimeStamp () const |
bool | HasObserver (const EventObject &event) const |
void | InvokeEvent (const EventObject &) |
void | InvokeEvent (const EventObject &) const |
virtual void | Modified () const |
void | Register () const override |
void | RemoveAllObservers () |
void | RemoveObserver (unsigned long tag) const |
void | SetDebug (bool debugFlag) const |
void | SetReferenceCount (int) override |
void | UnRegister () const noexcept override |
void | SetMetaDataDictionary (const MetaDataDictionary &rhs) |
void | SetMetaDataDictionary (MetaDataDictionary &&rrhs) |
virtual void | SetObjectName (std::string _arg) |
virtual const std::string & | GetObjectName () const |
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Pointer | Clone () const |
virtual void | Delete () |
virtual int | GetReferenceCount () const |
void | Print (std::ostream &os, Indent indent=0) const |
Static Public Attributes | |
static constexpr unsigned int | ImageDimension = TOutputImage::ImageDimension |
static constexpr unsigned int | InputImageDimension = TInputImage::ImageDimension |
static constexpr unsigned int | OutputImageDimension = TOutputImage::ImageDimension |
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static constexpr unsigned int | ImageDimension = TOutputImage::ImageDimension |
static constexpr unsigned int | InputImageDimension = TInputImage::ImageDimension |
static constexpr unsigned int | OutputImageDimension = TOutputImage::ImageDimension |
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static constexpr unsigned int | InputImageDimension = TInputImage::ImageDimension |
static constexpr unsigned int | OutputImageDimension = TOutputImage::ImageDimension |
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static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | OutputImageDimension |
static constexpr unsigned int | OutputImageDimension |
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static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | OutputImageDimension |
static constexpr unsigned int | OutputImageDimension |
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static constexpr unsigned int | OutputImageDimension |
Private Attributes | |
SizeType | m_CropBorder {} |
Additional Inherited Members | |
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using | InputToOutputRegionCopierType |
using | OutputToInputRegionCopierType |
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static const ImageRegionSplitterBase * | GetGlobalDefaultSplitter () |
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION | ThreaderCallback (void *arg) |
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template<typename TSourceObject> | |
static void | MakeRequiredOutputs (TSourceObject &sourceObject, const DataObjectPointerArraySizeType numberOfRequiredOutputs) |
static constexpr float | progressFixedToFloat (uint32_t fixed) |
static uint32_t | progressFloatToFixed (float f) |
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std::mutex | m_LabelObjectContainerLock |
std::mutex | m_LabelObjectContainerLock |
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bool | m_DynamicMultiThreading |
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TimeStamp | m_OutputInformationMTime {} |
bool | m_Updating {} |
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std::atomic< int > | m_ReferenceCount {} |
using itk::AutoCropLabelMapFilter< TInputImage >::ConstPointer = SmartPointer<const Self> |
Definition at line 62 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::IndexType = typename InputImageType::IndexType |
Definition at line 85 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::InputImageConstPointer = typename InputImageType::ConstPointer |
Definition at line 79 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::InputImagePixelType = typename InputImageType::PixelType |
Definition at line 81 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::InputImagePointer = typename InputImageType::Pointer |
Definition at line 78 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::InputImageRegionType = typename InputImageType::RegionType |
Definition at line 80 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::InputImageType = TInputImage |
Some convenient type alias.
Definition at line 77 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::LabelObjectType = typename InputImageType::LabelObjectType |
Definition at line 82 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::PixelType = typename InputImageType::PixelType |
Definition at line 84 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::Pointer = SmartPointer<Self> |
Definition at line 61 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::RegionType = typename InputImageType::RegionType |
Definition at line 87 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::Self = AutoCropLabelMapFilter |
Standard class type aliases.
Definition at line 59 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::SizeType = typename InputImageType::SizeType |
Definition at line 86 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::Superclass = ChangeRegionLabelMapFilter<TInputImage> |
Definition at line 60 of file itkAutoCropLabelMapFilter.h.
using itk::AutoCropLabelMapFilter< TInputImage >::TOutputImage = TInputImage |
Definition at line 89 of file itkAutoCropLabelMapFilter.h.
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protected |
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overrideprotecteddefault |
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virtual |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
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overrideprotectedvirtual |
Generate the information describing the output data. The default implementation of this method will copy information from the input to the output. A filter may override this method if its output will have different information than its input. For instance, a filter that shrinks an image will need to provide an implementation for this method that changes the spacing of the pixels. Such filters should call their superclass' implementation of this method prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.
Reimplemented from itk::ProcessObject.
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virtual |
Set/Get the border added to the mask before the crop. The default is 0 on * all the axis.
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overridevirtual |
Reimplemented from itk::LightObject.
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static |
Standard New method.
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overrideprotectedvirtual |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::LightObject.
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virtual |
Set/Get the border added to the mask before the crop. The default is 0 on * all the axis.
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staticconstexpr |
Definition at line 94 of file itkAutoCropLabelMapFilter.h.
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staticconstexpr |
ImageDimension constants
Definition at line 92 of file itkAutoCropLabelMapFilter.h.
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private |
Definition at line 114 of file itkAutoCropLabelMapFilter.h.
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staticconstexpr |
Definition at line 93 of file itkAutoCropLabelMapFilter.h.