#include <itkImageMomentsCalculator.h>

Detailed Description

template<typename TImage>
class itk::ImageMomentsCalculator< TImage >

Compute moments of an n-dimensional image.

This class provides methods for computing the moments and related properties of a single-echo image. Computing the (non-central) moments of a large image can easily take a million times longer than computing the various other values derived from them, so we compute the moments only on explicit request, and save their values (in an ImageMomentsCalculator object) for later retrieval by the user.

The non-central moments computed by this class are not really intended for general use and are therefore in index coordinates; that is, we pretend that the index that selects a particular pixel also equals its physical coordinates. The center of gravity, central moments, principal moments and principal axes are all more generally useful and are computed in the physical coordinates defined by the Origin and Spacing parameters of the image.

The methods that return values return the values themselves rather than references because the cost is small compared to the cost of computing the moments and doing so simplifies memory management for the caller.

Todo:: It's not yet clear how multi-echo images should be handled here.

Definition at line 60 of file itkImageMomentsCalculator.h.

Inheritance diagram for itk::ImageMomentsCalculator< TImage >:

Collaboration diagram for itk::ImageMomentsCalculator< TImage >:

Public Types
using	AffineTransformPointer = typename AffineTransformType::Pointer

using	AffineTransformType = AffineTransform< double, Self::ImageDimension >

using	ConstPointer = SmartPointer< const Self >

using	ImageConstPointer = typename ImageType::ConstPointer

using	ImagePointer = typename ImageType::Pointer

using	ImageType = TImage

using	MatrixType = Matrix< ScalarType, Self::ImageDimension, Self::ImageDimension >

using	Pointer = SmartPointer< Self >

using	ScalarType = double

using	Self = ImageMomentsCalculator< TImage >

using	SpatialObjectConstPointer = typename SpatialObjectType::ConstPointer

using	SpatialObjectPointer = typename SpatialObjectType::Pointer

using	SpatialObjectType = SpatialObject< Self::ImageDimension >

using	Superclass = Object

using	VectorType = Vector< ScalarType, Self::ImageDimension >

Public Types inherited from itk::Object
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = Object

using	Superclass = LightObject

Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = LightObject

Public Member Functions
void	Compute ()

VectorType	GetCenterOfGravity () const

MatrixType	GetCentralMoments () const

VectorType	GetFirstMoments () const

const char *	GetNameOfClass () const override

AffineTransformPointer	GetPhysicalAxesToPrincipalAxesTransform () const

AffineTransformPointer	GetPrincipalAxesToPhysicalAxesTransform () const

VectorType	GetPrincipalMoments () const

MatrixType	GetSecondMoments () const

ScalarType	GetTotalMass () const


virtual void	SetImage (const ImageType *image)


virtual void	SetSpatialObjectMask (const SpatialObject< Self::ImageDimension > *so)


MatrixType	GetPrincipalAxes () const

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *cmd) const

unsigned long	AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const

LightObject::Pointer	CreateAnother () const override

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary ()

const MetaDataDictionary &	GetMetaDataDictionary () const

virtual ModifiedTimeType	GetMTime () const

const char *	GetNameOfClass () const override

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

void	Register () const override

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag) const

void	SetDebug (bool debugFlag) const

void	SetReferenceCount (int) override

void	UnRegister () const noexcept override

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

void	SetMetaDataDictionary (MetaDataDictionary &&rrhs)

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
Pointer	Clone () const

virtual Pointer	CreateAnother () const

virtual void	Delete ()

virtual const char *	GetNameOfClass () const

virtual int	GetReferenceCount () const

void	Print (std::ostream &os, Indent indent=0) const

virtual void	Register () const

virtual void	SetReferenceCount (int)

virtual void	UnRegister () const noexcept

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool val)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Static Public Attributes
static constexpr unsigned int	ImageDimension = TImage::ImageDimension

Protected Member Functions
	ImageMomentsCalculator ()

void	PrintSelf (std::ostream &os, Indent indent) const override

	~ImageMomentsCalculator () override=default

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	SetTimeStamp (const TimeStamp &timeStamp)

	~Object () override

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintSelf (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Private Attributes
VectorType	m_Cg {}

MatrixType	m_Cm {}

ImageConstPointer	m_Image {}

ScalarType	m_M0 {}

VectorType	m_M1 {}

MatrixType	m_M2 {}

MatrixType	m_Pa {}

VectorType	m_Pm {}

SpatialObjectConstPointer	m_SpatialObjectMask {}

bool	m_Valid {}

Additional Inherited Members
Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount {}

Member Typedef Documentation

◆ AffineTransformPointer

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::AffineTransformPointer = typename AffineTransformType::Pointer

Definition at line 105 of file itkImageMomentsCalculator.h.

◆ AffineTransformType

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::AffineTransformType = AffineTransform<double, Self::ImageDimension>

Affine transform for mapping to and from principal axis

Definition at line 104 of file itkImageMomentsCalculator.h.

◆ ConstPointer

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::ConstPointer = SmartPointer<const Self>

Definition at line 69 of file itkImageMomentsCalculator.h.

◆ ImageConstPointer

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::ImageConstPointer = typename ImageType::ConstPointer

Definition at line 101 of file itkImageMomentsCalculator.h.

◆ ImagePointer

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::ImagePointer = typename ImageType::Pointer

Standard image type pointer within this class.

Definition at line 100 of file itkImageMomentsCalculator.h.

◆ ImageType

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::ImageType = TImage

Standard image type within this class.

Definition at line 97 of file itkImageMomentsCalculator.h.

◆ MatrixType

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::MatrixType = Matrix<ScalarType, Self::ImageDimension, Self::ImageDimension>

Standard matrix type within this class.

Definition at line 94 of file itkImageMomentsCalculator.h.

◆ Pointer

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::Pointer = SmartPointer<Self>

Definition at line 68 of file itkImageMomentsCalculator.h.

◆ ScalarType

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::ScalarType = double

Standard scalar type within this class.

Definition at line 81 of file itkImageMomentsCalculator.h.

◆ Self

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::Self = ImageMomentsCalculator<TImage>

Standard class type aliases.

Definition at line 66 of file itkImageMomentsCalculator.h.

◆ SpatialObjectConstPointer

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::SpatialObjectConstPointer = typename SpatialObjectType::ConstPointer

Definition at line 91 of file itkImageMomentsCalculator.h.

◆ SpatialObjectPointer

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::SpatialObjectPointer = typename SpatialObjectType::Pointer

Spatial Object member types used within this class.

Definition at line 90 of file itkImageMomentsCalculator.h.

◆ SpatialObjectType

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::SpatialObjectType = SpatialObject<Self::ImageDimension>

Spatial Object type within this class.

Definition at line 87 of file itkImageMomentsCalculator.h.

◆ Superclass

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::Superclass = Object

Definition at line 67 of file itkImageMomentsCalculator.h.

◆ VectorType

template<typename TImage >

using itk::ImageMomentsCalculator< TImage >::VectorType = Vector<ScalarType, Self::ImageDimension>

Standard vector type within this class.

Definition at line 84 of file itkImageMomentsCalculator.h.

Constructor & Destructor Documentation

◆ ImageMomentsCalculator()

template<typename TImage >

itk::ImageMomentsCalculator< TImage >::ImageMomentsCalculator ( )

protected

◆ ~ImageMomentsCalculator()

template<typename TImage >

itk::ImageMomentsCalculator< TImage >::~ImageMomentsCalculator ( )

overrideprotecteddefault

Member Function Documentation

◆ Compute()

template<typename TImage >

void itk::ImageMomentsCalculator< TImage >::Compute ( )

Compute moments of a new or modified image. This method computes the moments of the image given as a parameter and stores them in the object. The values of these moments and related parameters can then be retrieved by using other methods of this object.

◆ GetCenterOfGravity()

template<typename TImage >

VectorType itk::ImageMomentsCalculator< TImage >::GetCenterOfGravity ( ) const

Return center of gravity, in physical coordinates. This method returns the center of gravity of the image whose moments were last computed by this object. The center of gravity is computed in physical coordinates.

◆ GetCentralMoments()

template<typename TImage >

MatrixType itk::ImageMomentsCalculator< TImage >::GetCentralMoments ( ) const

Return second central moments, in physical coordinates. This method returns the central second moments of the image whose moments were last computed by this object. The central moments are computed in physical coordinates.

◆ GetFirstMoments()

template<typename TImage >

VectorType itk::ImageMomentsCalculator< TImage >::GetFirstMoments ( ) const

Return first moments about origin, in index coordinates. This method returns the first moments around the origin of the image whose moments were last computed by this object. For simplicity, these moments are computed in index coordinates rather than physical coordinates.

◆ GetNameOfClass()

template<typename TImage >

const char * itk::ImageMomentsCalculator< TImage >::GetNameOfClass ( ) const

overridevirtual

See also: LightObject::GetNameOfClass()

Reimplemented from itk::Object.

◆ GetPhysicalAxesToPrincipalAxesTransform()

template<typename TImage >

AffineTransformPointer itk::ImageMomentsCalculator< TImage >::GetPhysicalAxesToPrincipalAxesTransform ( ) const

Get the affine transform from physical axes to principal axes This method returns an affine transform which transforms from the physical coordinate system to the principal axes coordinate system.

◆ GetPrincipalAxes()

template<typename TImage >

MatrixType itk::ImageMomentsCalculator< TImage >::GetPrincipalAxes ( ) const

Return principal axes, in physical coordinates. This method returns the principal axes of the image whose moments were last computed by this object. The moments are returned as an orthogonal matrix, each row of which corresponds to one principal moment; for example, the principal axis corresponding to the smallest principal moment is the vector m[0], where m is the value returned by this method. The matrix of principal axes is guaranteed to be a proper rotation; that is, to have determinant +1 and to preserve parity. (Unless you have foolishly made one or more of the spacing values negative; in that case, you get to figure out the consequences.) The moments are computed in physical coordinates.

◆ GetPrincipalAxesToPhysicalAxesTransform()

template<typename TImage >

AffineTransformPointer itk::ImageMomentsCalculator< TImage >::GetPrincipalAxesToPhysicalAxesTransform ( ) const

Get the affine transform from principal axes to physical axes This method returns an affine transform which transforms from the principal axes coordinate system to physical coordinates.

◆ GetPrincipalMoments()

template<typename TImage >

VectorType itk::ImageMomentsCalculator< TImage >::GetPrincipalMoments ( ) const

Return principal moments, in physical coordinates. This method returns the principal moments of the image whose moments were last computed by this object. The moments are returned as a vector, with the principal moments ordered from smallest to largest. The moments are computed in physical coordinates.

◆ GetSecondMoments()

template<typename TImage >

MatrixType itk::ImageMomentsCalculator< TImage >::GetSecondMoments ( ) const

Return second moments about origin, in index coordinates. This method returns the second moments around the origin of the image whose moments were last computed by this object. For simplicity, these moments are computed in index coordinates rather than physical coordinates.

◆ GetTotalMass()

template<typename TImage >

ScalarType itk::ImageMomentsCalculator< TImage >::GetTotalMass ( ) const

Return the total mass (or zeroth moment) of an image. This method returns the sum of pixel intensities (also known as the zeroth moment or the total mass) of the image whose moments were last computed by this object.

◆ New()

template<typename TImage >

static Pointer itk::ImageMomentsCalculator< TImage >::New ( )

static

Method for creation through the object factory.

◆ PrintSelf()

template<typename TImage >

void itk::ImageMomentsCalculator< TImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::Object.