ITK
6.0.0
Insight Toolkit
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#include <itkScalarChanAndVeseLevelSetFunction.h>
LevelSet function that computes a speed image based on regional integrals of probabilities.
This class implements a level set function that computes the speed image by integrating values on the image domain.
Based on the papers:
"An active contour model without edges" T. Chan and L. Vese. In Scale-Space Theories in Computer Vision, pages 141-151, 1999. "Segmenting and Tracking Fluorescent Cells in Dynamic 3-D Microscopy With Coupled Active Surfaces" Dufour, Shinin, Tajbakhsh, Guillen-Aghion, Olivo-Marin In IEEE Transactions on Image Processing, vol. 14, No 9, Sep. 2005
This code was taken from the Insight Journal paper:
"Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes" https://doi.org/10.54294/wvwmf8
That is based on the papers:
"Level Set Segmentation: Active Contours without edge" https://doi.org/10.54294/8jk6oy and "Level set segmentation using coupled active surfaces" https://doi.org/10.54294/23ugmy
Definition at line 75 of file itkScalarChanAndVeseLevelSetFunction.h.
Public Types | |
using | ConstFeatureIteratorType = ImageRegionConstIterator< FeatureImageType > |
using | ConstImageIteratorType = ImageRegionConstIteratorWithIndex< InputImageType > |
using | ConstPointer = SmartPointer< const Self > |
using | FeatureImageConstPointer = typename FeatureImageType::ConstPointer |
using | FeatureImageIteratorType = ImageRegionIteratorWithIndex< FeatureImageType > |
using | FeatureImageType = TFeatureImage |
using | ImageIteratorType = ImageRegionIteratorWithIndex< InputImageType > |
using | InputImageType = TInputImage |
using | ListImageType = Image< ListPixelType, Self::ImageDimension > |
using | ListPixelConstIterator = typename ListPixelType::const_iterator |
using | ListPixelIterator = typename ListPixelType::iterator |
using | ListPixelType = std::list< unsigned int > |
using | Pointer = SmartPointer< Self > |
using | Self = ScalarChanAndVeseLevelSetFunction |
using | Superclass = ScalarRegionBasedLevelSetFunction< TInputImage, TFeatureImage, TSharedData > |
Public Member Functions | |
const char * | GetNameOfClass () const override |
Static Public Member Functions | |
static Pointer | New () |
Static Public Attributes | |
static constexpr unsigned int | ImageDimension = TFeatureImage::ImageDimension |
Protected Member Functions | |
ScalarValueType | ComputeExternalTerm (const FeaturePixelType &iValue, const FeatureIndexType &iIdx) override |
ScalarValueType | ComputeInternalTerm (const FeaturePixelType &iValue, const FeatureIndexType &iIdx) override |
void | ComputeParameters () override |
ScalarChanAndVeseLevelSetFunction () | |
void | UpdateSharedDataInsideParameters (const unsigned int &iId, const FeaturePixelType &iVal, const ScalarValueType &iChange) override |
void | UpdateSharedDataOutsideParameters (const unsigned int &iId, const FeaturePixelType &iVal, const ScalarValueType &iChange) override |
void | UpdateSharedDataParameters () override |
~ScalarChanAndVeseLevelSetFunction () override=default | |
using itk::ScalarRegionBasedLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::ConstFeatureIteratorType = ImageRegionConstIterator<FeatureImageType> |
Definition at line 113 of file itkScalarRegionBasedLevelSetFunction.h.
using itk::ScalarRegionBasedLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::ConstImageIteratorType = ImageRegionConstIteratorWithIndex<InputImageType> |
Definition at line 111 of file itkScalarRegionBasedLevelSetFunction.h.
using itk::ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::ConstPointer = SmartPointer<const Self> |
Definition at line 84 of file itkScalarChanAndVeseLevelSetFunction.h.
using itk::ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::FeatureImageConstPointer = typename FeatureImageType::ConstPointer |
Definition at line 106 of file itkScalarChanAndVeseLevelSetFunction.h.
using itk::ScalarRegionBasedLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::FeatureImageIteratorType = ImageRegionIteratorWithIndex<FeatureImageType> |
Definition at line 112 of file itkScalarRegionBasedLevelSetFunction.h.
using itk::ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::FeatureImageType = TFeatureImage |
Definition at line 105 of file itkScalarChanAndVeseLevelSetFunction.h.
using itk::ScalarRegionBasedLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::ImageIteratorType = ImageRegionIteratorWithIndex<InputImageType> |
Definition at line 110 of file itkScalarRegionBasedLevelSetFunction.h.
using itk::ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::InputImageType = TInputImage |
Definition at line 94 of file itkScalarChanAndVeseLevelSetFunction.h.
using itk::ScalarRegionBasedLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::ListImageType = Image<ListPixelType, Self::ImageDimension> |
Definition at line 118 of file itkScalarRegionBasedLevelSetFunction.h.
using itk::ScalarRegionBasedLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::ListPixelConstIterator = typename ListPixelType::const_iterator |
Definition at line 116 of file itkScalarRegionBasedLevelSetFunction.h.
using itk::ScalarRegionBasedLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::ListPixelIterator = typename ListPixelType::iterator |
Definition at line 117 of file itkScalarRegionBasedLevelSetFunction.h.
using itk::ScalarRegionBasedLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::ListPixelType = std::list<unsigned int> |
Definition at line 115 of file itkScalarRegionBasedLevelSetFunction.h.
using itk::ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::Pointer = SmartPointer<Self> |
Definition at line 83 of file itkScalarChanAndVeseLevelSetFunction.h.
using itk::ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::Self = ScalarChanAndVeseLevelSetFunction |
Definition at line 81 of file itkScalarChanAndVeseLevelSetFunction.h.
using itk::ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage, TSharedData >::Superclass = ScalarRegionBasedLevelSetFunction<TInputImage, TFeatureImage, TSharedData> |
Definition at line 82 of file itkScalarChanAndVeseLevelSetFunction.h.
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Definition at line 134 of file itkScalarChanAndVeseLevelSetFunction.h.
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Method for creation through the object factory.
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staticconstexpr |
Definition at line 92 of file itkScalarChanAndVeseLevelSetFunction.h.