itkLabelMapContourOverlayImageFilter.h

Go to the documentation of this file.

/*=========================================================================
 *
 *  Copyright NumFOCUS
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         https://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef itkLabelMapContourOverlayImageFilter_h
#define itkLabelMapContourOverlayImageFilter_h
 
#include "itkLabelMapFilter.h"
#include "itkLabelOverlayFunctor.h"
#include "itkRGBPixel.h"
 
namespace itk
{

template <typename TLabelMap,
          typename TFeatureImage,
          typename TOutputImage = Image<RGBPixel<typename TFeatureImage::PixelType>, TFeatureImage::ImageDimension>>
class ITK_TEMPLATE_EXPORT LabelMapContourOverlayImageFilter : public LabelMapFilter<TLabelMap, TOutputImage>
{
public:
  ITK_DISALLOW_COPY_AND_MOVE(LabelMapContourOverlayImageFilter);

  using Self = LabelMapContourOverlayImageFilter;
  using Superclass = LabelMapFilter<TLabelMap, TOutputImage>;
  using Pointer = SmartPointer<Self>;
  using ConstPointer = SmartPointer<const Self>;

  using LabelMapType = TLabelMap;
  using LabelMapPointer = typename LabelMapType::Pointer;
  using LabelMapConstPointer = typename LabelMapType::ConstPointer;
  using LabelMapRegionType = typename LabelMapType::RegionType;
  using LabelMapPixelType = typename LabelMapType::PixelType;
  using LabelObjectType = typename LabelMapType::LabelObjectType;
  using LabelType = typename LabelObjectType::LabelType;
 
  using FeatureImageType = TFeatureImage;
  using FeatureImagePointer = typename FeatureImageType::Pointer;
  using FeatureImageConstPointer = typename FeatureImageType::ConstPointer;
  using FeatureImageRegionType = typename FeatureImageType::RegionType;
  using FeatureImagePixelType = typename FeatureImageType::PixelType;
 
  using OutputImageType = TOutputImage;
  using OutputImagePointer = typename OutputImageType::Pointer;
  using OutputImageConstPointer = typename OutputImageType::ConstPointer;
  using OutputImageRegionType = typename OutputImageType::RegionType;
  using OutputImagePixelType = typename OutputImageType::PixelType;
  using IndexType = typename OutputImageType::IndexType;
  using SizeType = typename OutputImageType::SizeType;
  using RegionType = typename OutputImageType::RegionType;
 
  using FunctorType =
    typename Functor::LabelOverlayFunctor<FeatureImagePixelType, LabelMapPixelType, OutputImagePixelType>;

  static constexpr unsigned int LabelMapDimension = TLabelMap::ImageDimension;
  static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension;
  static constexpr unsigned int ImageDimension = TOutputImage::ImageDimension;
 
  enum
  {
    PLAIN = 0,
    CONTOUR = 1,
    SLICE_CONTOUR = 2
  };
 
  enum
  {
    HIGH_LABEL_ON_TOP = 0,
    LOW_LABEL_ON_TOP = 1
  };

  itkNewMacro(Self);

  itkOverrideGetNameOfClassMacro(LabelMapContourOverlayImageFilter);

  void
  SetFeatureImage(TFeatureImage * input)
  {
    // Process object is not const-correct so the const casting is required.
    this->SetNthInput(1, const_cast<TFeatureImage *>(input));
  }

  FeatureImageType *
  GetFeatureImage()
  {
    return itkDynamicCastInDebugMode<FeatureImageType *>(const_cast<DataObject *>(this->ProcessObject::GetInput(1)));
  }

  void
  SetInput1(TLabelMap * input)
  {
    this->SetInput(input);
  }

  void
  SetInput2(TFeatureImage * input)
  {
    this->SetFeatureImage(input);
  }

  itkSetMacro(Opacity, double);
  itkGetConstReferenceMacro(Opacity, double);
  itkSetMacro(Type, int);
  itkGetConstReferenceMacro(Type, int);
  itkSetMacro(Priority, int);
  itkGetConstReferenceMacro(Priority, int);
  itkSetMacro(DilationRadius, SizeType);
  itkGetConstReferenceMacro(DilationRadius, SizeType);
  itkSetMacro(ContourThickness, SizeType);
  itkGetConstReferenceMacro(ContourThickness, SizeType);
  itkSetMacro(SliceDimension, int);
  itkGetConstReferenceMacro(SliceDimension, int);
  virtual void
  SetFunctor(const FunctorType & functor)
  {
    if (m_Functor != functor)
    {
      m_Functor = functor;
      this->Modified();
    }
  }
  FunctorType &
  GetFunctor()
  {
    return m_Functor;
  }
  const FunctorType &
  GetFunctor() const
  {
    return m_Functor;
  }

protected:
  LabelMapContourOverlayImageFilter();
  ~LabelMapContourOverlayImageFilter() override = default;

  void
  GenerateInputRequestedRegion() override;

  void
  EnlargeOutputRequestedRegion(DataObject * itkNotUsed(output)) override;
 
  void
  BeforeThreadedGenerateData() override;
 
  void
  DynamicThreadedGenerateData(const OutputImageRegionType & outputRegionForThread) override;
 
  // part of a compile error workaround for GCC 4.8.5-28 (Red Hat) from 20150623
  void
  SuperclassDynamicTGD(const OutputImageRegionType & outputRegion)
  {
    Superclass::DynamicThreadedGenerateData(outputRegion);
  }
 
  void
  GenerateData() override;
 
  void
  ThreadedProcessLabelObject(LabelObjectType * labelObject) override;
 
  void
  GenerateOutputInformation() override;
 
  void
  PrintSelf(std::ostream & os, Indent indent) const override;
 
  LabelMapType *
  GetLabelMap() override
  {
    return m_TempImage;
  }
 
private:
  double      m_Opacity{};
  int         m_Type{};
  int         m_Priority{};
  SizeType    m_ContourThickness{};
  SizeType    m_DilationRadius{};
  int         m_SliceDimension{};
  FunctorType m_Functor{};
 
  LabelMapPointer m_TempImage{};
 
}; // end of class
 
} // end namespace itk
 
#ifndef ITK_MANUAL_INSTANTIATION
#  include "itkLabelMapContourOverlayImageFilter.hxx"
#endif
 
#endif