itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField > Class Template Reference

#include <itkGPUDemonsRegistrationFunction.h>

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>
class itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >

This class encapsulate the PDE which drives the demons registration algorithm. It is used by DemonsRegistrationFilter to compute the output deformation field which will map a moving image onto a a fixed image.

Non-integer moving image values are obtained by using interpolation. The default interpolator is of type LinearInterpolateImageFunction. The user may set other interpolators via method SetMovingImageInterpolator. Note that the input interpolator must derive from baseclass InterpolateImageFunction.

This class is templated over the fixed image type, moving image type, and the deformation field type.

Warning

This filter assumes that the fixed image type, moving image type and deformation field type all have the same number of dimensions.

See also

DemonsRegistrationFilter

Definition at line 58 of file itkGPUDemonsRegistrationFunction.h.

Inheritance diagram for itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >:

Collaboration diagram for itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >:

Classes
struct	GlobalDataStruct

Public Types
using	ConstPointer = SmartPointer<const Self>
using	CoordinateType = double
using	CovariantVectorType = CovariantVector<double, Self::ImageDimension>
using	DefaultInterpolatorType = LinearInterpolateImageFunction<MovingImageType, CoordinateType>
using	DisplacementFieldType
using	DisplacementFieldTypePointer
using	FixedImagePointer
using	FixedImageType
using	GPUDataPointer = GPUDataManager::Pointer
using	GradientCalculatorPointer = typename GradientCalculatorType::Pointer
using	GradientCalculatorType = CentralDifferenceImageFunction<FixedImageType>
using	IndexType = typename FixedImageType::IndexType
using	InterpolatorPointer = typename InterpolatorType::Pointer
using	InterpolatorType = InterpolateImageFunction<MovingImageType, CoordinateType>
using	MovingImageGradientCalculatorPointer = typename MovingImageGradientCalculatorType::Pointer
using	MovingImageGradientCalculatorType = CentralDifferenceImageFunction<MovingImageType, CoordinateType>
using	MovingImagePointer
using	MovingImageType
using	Pointer = SmartPointer<Self>
using	PointType = typename InterpolatorType::PointType
using	Self = GPUDemonsRegistrationFunction
using	SizeType = typename FixedImageType::SizeType
using	SpacingType = typename FixedImageType::SpacingType
using	Superclass = GPUPDEDeformableRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>
Public Types inherited from itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >
using	ConstPointer = SmartPointer<const Self>
using	DisplacementFieldType = TDisplacementField
using	DisplacementFieldTypePointer = typename DisplacementFieldType::Pointer
using	FixedImagePointer = typename FixedImageType::ConstPointer
using	FixedImageType = TFixedImage
using	MovingImagePointer = typename MovingImageType::ConstPointer
using	MovingImageType = TMovingImage
using	Pointer = SmartPointer<Self>
using	Self = GPUPDEDeformableRegistrationFunction
using	Superclass = GPUFiniteDifferenceFunction<TDisplacementField>
Public Types inherited from itk::GPUFiniteDifferenceFunction< TDisplacementField >
using	ConstPointer
typedef ZeroFluxNeumannBoundaryCondition< ImageType >	DefaultBoundaryConditionType
using	DefaultBoundaryConditionType
using	DifferenceFunctionType
typedef Vector< float, Self::ImageDimension >	FloatOffsetType
using	FloatOffsetType
typedef TDisplacementField	ImageType
using	ImageType
typedef ConstNeighborhoodIterator< TDisplacementField, DefaultBoundaryConditionType >	NeighborhoodType
using	NeighborhoodType
typedef double	PixelRealType
using	PixelRealType
typedef typename ImageType::PixelType	PixelType
using	PixelType
using	Pointer
typedef typename ConstNeighborhoodIterator< TDisplacementField >::RadiusType	RadiusType
using	RadiusType
using	Self
using	Superclass
typedef double	TimeStepType
using	TimeStepType
Public Types inherited from itk::FiniteDifferenceFunction< TDisplacementField >
using	ConstPointer
using	DefaultBoundaryConditionType
using	FloatOffsetType
using	ImageType
using	NeighborhoodScalesType
using	NeighborhoodType
using	PixelRealType
using	PixelType
using	Pointer
using	RadiusType
using	Self
using	Superclass
using	TimeStepType
Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer<const Self>
using	Pointer = SmartPointer<Self>
using	Self = LightObject

Public Member Functions
TimeStepType	ComputeGlobalTimeStep (void *GlobalData) const override
PixelType	ComputeUpdate (const NeighborhoodType &neighborhood, void *globalData, const FloatOffsetType &offset=FloatOffsetType(0.0)) override
virtual::itk::LightObject::Pointer	CreateAnother () const
void *	GetGlobalDataPointer () const override
virtual double	GetIntensityDifferenceThreshold () const
virtual double	GetMetric () const
InterpolatorType *	GetMovingImageInterpolator ()
const char *	GetNameOfClass () const override
virtual double	GetRMSChange () const
void	GPUAllocateMetricData (unsigned int numPixels) override
void	GPUComputeUpdate (const DisplacementFieldTypePointer output, DisplacementFieldTypePointer update, void *gd) override
void	GPUReleaseMetricData () override
void	InitializeIteration () override
	itkGetOpenCLSourceFromKernelMacro (GPUDemonsRegistrationFunctionKernel)
void	ReleaseGlobalDataPointer (void *GlobalData) const override
virtual void	SetIntensityDifferenceThreshold (double)
void	SetMovingImageInterpolator (InterpolatorType *ptr)
virtual void	SetUseMovingImageGradient (bool flag)
virtual bool	GetUseMovingImageGradient () const
Public Member Functions inherited from itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >
DisplacementFieldType *	GetDisplacementField ()
double	GetEnergy () const
const FixedImageType *	GetFixedImage () const
double	GetGradientStep () const
const MovingImageType *	GetMovingImage () const
const char *	GetNameOfClass () const override
bool	GetNormalizeGradient () const
void	SetDisplacementField (DisplacementFieldTypePointer ptr)
void	SetEnergy (double e)
void	SetFixedImage (const FixedImageType *ptr)
void	SetGradientStep (double e)
void	SetMovingImage (const MovingImageType *ptr)
void	SetNormalizeGradient (bool e)
Public Member Functions inherited from itk::GPUFiniteDifferenceFunction< TDisplacementField >
virtual void	GPUComputeUpdate (const typename TDisplacementField::Pointer output, typename TDisplacementField::Pointer update, void *gd)=0
virtual void	GPUComputeUpdate (const typename TDisplacementField::Pointer output, typename TDisplacementField::Pointer update, void *gd)=0
PixelType	ComputeUpdate (const NeighborhoodType &neighborhood, void *globalData, const FloatOffsetType &offset=FloatOffsetType(0.0)) override
PixelType	ComputeUpdate (const NeighborhoodType &neighborhood, void *globalData, const FloatOffsetType &offset=FloatOffsetType(0.0)) override
Public Member Functions inherited from itk::FiniteDifferenceFunction< TDisplacementField >
const NeighborhoodScalesType	ComputeNeighborhoodScales () const
const NeighborhoodScalesType	ComputeNeighborhoodScales () const
const RadiusType &	GetRadius () const
const RadiusType &	GetRadius () const
void	GetScaleCoefficients (PixelRealType vals[ImageDimension]) const
void	GetScaleCoefficients (PixelRealType vals[ImageDimension]) const
void	SetRadius (const RadiusType &r)
void	SetRadius (const RadiusType &r)
void	SetScaleCoefficients (const PixelRealType vals[ImageDimension])
void	SetScaleCoefficients (const PixelRealType vals[ImageDimension])
Public Member Functions inherited from itk::LightObject
Pointer	Clone () const
virtual void	Delete ()
virtual int	GetReferenceCount () const
void	Print (std::ostream &os, Indent indent=0) const
virtual void	Register () const
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const noexcept

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()
static Pointer	New ()

Static Public Attributes
static constexpr unsigned int	ImageDimension = Superclass::ImageDimension
Static Public Attributes inherited from itk::GPUFiniteDifferenceFunction< TDisplacementField >
static constexpr unsigned int	ImageDimension
static constexpr unsigned int	ImageDimension
Static Public Attributes inherited from itk::FiniteDifferenceFunction< TDisplacementField >
static constexpr unsigned int	ImageDimension
static constexpr unsigned int	ImageDimension

Protected Types
using	FixedImageNeighborhoodIteratorType = ConstNeighborhoodIterator<FixedImageType>

Protected Member Functions
	GPUDemonsRegistrationFunction ()
void	PrintSelf (std::ostream &os, Indent indent) const override
	~GPUDemonsRegistrationFunction () override=default
Protected Member Functions inherited from itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >
	GPUPDEDeformableRegistrationFunction ()
void	PrintSelf (std::ostream &os, Indent indent) const override
	~GPUPDEDeformableRegistrationFunction () override=default
Protected Member Functions inherited from itk::GPUFiniteDifferenceFunction< TDisplacementField >
	GPUFiniteDifferenceFunction ()
	GPUFiniteDifferenceFunction ()
	~GPUFiniteDifferenceFunction () override=default
	~GPUFiniteDifferenceFunction () override=default
Protected Member Functions inherited from itk::FiniteDifferenceFunction< TDisplacementField >
	FiniteDifferenceFunction ()
	FiniteDifferenceFunction ()
	~FiniteDifferenceFunction () override=default
	~FiniteDifferenceFunction () override=default
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Protected Attributes
int	m_ComputeUpdateGPUKernelHandle {}
Protected Attributes inherited from itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >
DisplacementFieldTypePointer	m_DisplacementField {}
double	m_Energy {}
FixedImagePointer	m_FixedImage {}
double	m_GradientStep {}
MovingImagePointer	m_MovingImage {}
bool	m_NormalizeGradient {}
Protected Attributes inherited from itk::GPUFiniteDifferenceFunction< TDisplacementField >
int	m_ComputeUpdateGPUKernelHandle
int	m_ComputeUpdateGPUKernelHandle
GPUKernelManager::Pointer	m_GPUKernelManager
GPUKernelManager::Pointer	m_GPUKernelManager
Protected Attributes inherited from itk::FiniteDifferenceFunction< TDisplacementField >
RadiusType	m_Radius
RadiusType	m_Radius
PixelRealType	m_ScaleCoefficients [ImageDimension]
PixelRealType	m_ScaleCoefficients [ImageDimension]
Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount {}

Private Attributes
double	m_DenominatorThreshold {}
GradientCalculatorPointer	m_FixedImageGradientCalculator {}
GPUReduction< int >::Pointer	m_GPUPixelCounter {}
GPUReduction< float >::Pointer	m_GPUSquaredChange {}
GPUReduction< float >::Pointer	m_GPUSquaredDifference {}
double	m_IntensityDifferenceThreshold {}
double	m_Metric {}
std::mutex	m_MetricCalculationMutex {}
MovingImageGradientCalculatorPointer	m_MovingImageGradientCalculator {}
InterpolatorPointer	m_MovingImageInterpolator {}
double	m_Normalizer {}
SizeValueType	m_NumberOfPixelsProcessed {}
double	m_RMSChange {}
double	m_SumOfSquaredChange {}
double	m_SumOfSquaredDifference {}
TimeStepType	m_TimeStep {}
bool	m_UseMovingImageGradient {}
PixelType	m_ZeroUpdateReturn {}

Member Typedef Documentation

ConstPointer

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ConstPointer = SmartPointer<const Self>

Definition at line 68 of file itkGPUDemonsRegistrationFunction.h.

CoordinateType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::CoordinateType = double

Interpolator type.

Definition at line 102 of file itkGPUDemonsRegistrationFunction.h.

CovariantVectorType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::CovariantVectorType = CovariantVector<double, Self::ImageDimension>

Covariant vector type.

Definition at line 113 of file itkGPUDemonsRegistrationFunction.h.

DefaultInterpolatorType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::DefaultInterpolatorType = LinearInterpolateImageFunction<MovingImageType, CoordinateType>

Definition at line 110 of file itkGPUDemonsRegistrationFunction.h.

DisplacementFieldType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldType

Deformation field type.

Definition at line 64 of file itkGPUPDEDeformableRegistrationFunction.h.

DisplacementFieldTypePointer

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldTypePointer

Definition at line 65 of file itkGPUPDEDeformableRegistrationFunction.h.

FixedImageNeighborhoodIteratorType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::FixedImageNeighborhoodIteratorType = ConstNeighborhoodIterator<FixedImageType>

protected

FixedImage image neighborhood iterator type.

Definition at line 247 of file itkGPUDemonsRegistrationFunction.h.

FixedImagePointer

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::FixedImagePointer

Definition at line 61 of file itkGPUPDEDeformableRegistrationFunction.h.

FixedImageType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::FixedImageType

FixedImage image type.

Definition at line 60 of file itkGPUPDEDeformableRegistrationFunction.h.

GPUDataPointer

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GPUDataPointer = GPUDataManager::Pointer

GPU data pointer type.

Definition at line 124 of file itkGPUDemonsRegistrationFunction.h.

GradientCalculatorPointer

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GradientCalculatorPointer = typename GradientCalculatorType::Pointer

Definition at line 117 of file itkGPUDemonsRegistrationFunction.h.

GradientCalculatorType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GradientCalculatorType = CentralDifferenceImageFunction<FixedImageType>

Fixed image gradient calculator type.

Definition at line 116 of file itkGPUDemonsRegistrationFunction.h.

IndexType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::IndexType = typename FixedImageType::IndexType

Definition at line 83 of file itkGPUDemonsRegistrationFunction.h.

InterpolatorPointer

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::InterpolatorPointer = typename InterpolatorType::Pointer

Definition at line 108 of file itkGPUDemonsRegistrationFunction.h.

InterpolatorType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::InterpolatorType = InterpolateImageFunction<MovingImageType, CoordinateType>

Definition at line 107 of file itkGPUDemonsRegistrationFunction.h.

MovingImageGradientCalculatorPointer

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingImageGradientCalculatorPointer = typename MovingImageGradientCalculatorType::Pointer

Definition at line 121 of file itkGPUDemonsRegistrationFunction.h.

MovingImageGradientCalculatorType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingImageGradientCalculatorType = CentralDifferenceImageFunction<MovingImageType, CoordinateType>

Moving image gradient calculator type.

Definition at line 120 of file itkGPUDemonsRegistrationFunction.h.

MovingImagePointer

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingImagePointer

Definition at line 57 of file itkGPUPDEDeformableRegistrationFunction.h.

MovingImageType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingImageType

MovingImage image type.

Definition at line 56 of file itkGPUPDEDeformableRegistrationFunction.h.

Pointer

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::Pointer = SmartPointer<Self>

Definition at line 67 of file itkGPUDemonsRegistrationFunction.h.

PointType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::PointType = typename InterpolatorType::PointType

Definition at line 109 of file itkGPUDemonsRegistrationFunction.h.

Self

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::Self = GPUDemonsRegistrationFunction

Standard class type aliases.

Definition at line 65 of file itkGPUDemonsRegistrationFunction.h.

SizeType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SizeType = typename FixedImageType::SizeType

Definition at line 84 of file itkGPUDemonsRegistrationFunction.h.

SpacingType

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SpacingType = typename FixedImageType::SpacingType

Definition at line 85 of file itkGPUDemonsRegistrationFunction.h.

Superclass

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

using itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::Superclass = GPUPDEDeformableRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>

Definition at line 66 of file itkGPUDemonsRegistrationFunction.h.

Constructor & Destructor Documentation

GPUDemonsRegistrationFunction()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GPUDemonsRegistrationFunction ( )

protected

~GPUDemonsRegistrationFunction()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::~GPUDemonsRegistrationFunction ( )

overrideprotecteddefault

Member Function Documentation

ComputeGlobalTimeStep()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

TimeStepType itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ComputeGlobalTimeStep ( void * GlobalData ) const

inlineoverridevirtual

This class uses a constant timestep of 1.

Implements itk::FiniteDifferenceFunction< TDisplacementField >.

Definition at line 145 of file itkGPUDemonsRegistrationFunction.h.

ComputeUpdate()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

PixelType itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ComputeUpdate ( const NeighborhoodType & neighborhood, void * globalData, const FloatOffsetType & offset = FloatOffsetType(0.0) )

overridevirtual

Compute update at the specified neighbourhood.

Called by a finite difference solver image filter at each pixel that does not lie on a data set boundary.

Implements itk::FiniteDifferenceFunction< TDisplacementField >.

CreateAnother()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

virtual::itk::LightObject::Pointer itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::CreateAnother ( ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

GetGlobalDataPointer()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

void * itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetGlobalDataPointer ( ) const

inlineoverridevirtual

Return a pointer to a global data structure that is passed to this object from the solver at each calculation.

Implements itk::FiniteDifferenceFunction< TDisplacementField >.

Definition at line 153 of file itkGPUDemonsRegistrationFunction.h.

GetIntensityDifferenceThreshold()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

virtual double itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetIntensityDifferenceThreshold ( ) const

virtual

GetMetric()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

virtual double itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMetric ( ) const

inlinevirtual

Get the metric value.

The metric value is the mean square difference in intensity between the fixed image and transforming moving image computed over the overlapping region between the two images.

Definition at line 202 of file itkGPUDemonsRegistrationFunction.h.

GetMovingImageInterpolator()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

InterpolatorType * itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMovingImageInterpolator ( )

inline

Get the moving image interpolator.

Definition at line 138 of file itkGPUDemonsRegistrationFunction.h.

GetNameOfClass()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

const char * itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetNameOfClass ( ) const

overridevirtual

See also

LightObject::GetNameOfClass()

Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.

GetRMSChange()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

virtual double itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetRMSChange ( ) const

inlinevirtual

Get the rms change in deformation field.

Definition at line 209 of file itkGPUDemonsRegistrationFunction.h.

GetUseMovingImageGradient()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

virtual bool itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetUseMovingImageGradient ( ) const

inlinevirtual

Select if the fixed image or moving image gradient is used for computing the demon forces. The fixed image gradient is used by default.

Definition at line 223 of file itkGPUDemonsRegistrationFunction.h.

GPUAllocateMetricData()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

void itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GPUAllocateMetricData ( unsigned int numPixels )

overridevirtual

Allocate GPU buffers for computing metric statistics

Reimplemented from itk::GPUFiniteDifferenceFunction< TDisplacementField >.

GPUComputeUpdate()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

void itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GPUComputeUpdate ( const DisplacementFieldTypePointer output, DisplacementFieldTypePointer update, void * gd )

override

Compute update at the specified neighbourhood.

GPUReleaseMetricData()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

void itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GPUReleaseMetricData ( )

overridevirtual

Release GPU buffers for computing metric statistics.

Reimplemented from itk::GPUFiniteDifferenceFunction< TDisplacementField >.

InitializeIteration()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

void itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::InitializeIteration ( )

overridevirtual

Set the object's state before each iteration.

Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.

itkGetOpenCLSourceFromKernelMacro()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::itkGetOpenCLSourceFromKernelMacro

(

GPUDemonsRegistrationFunctionKernel

)

Get OpenCL Kernel source as a string, creates a GetOpenCLSource method

New()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

static Pointer itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::New ( )

static

Method for creation through the object factory.

PrintSelf()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

void itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::PrintSelf ( std::ostream & os, Indent indent ) const

overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.

ReleaseGlobalDataPointer()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

void itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ReleaseGlobalDataPointer ( void * GlobalData ) const

overridevirtual

Release memory for global data structure.

Updates the metric and releases the per-thread-global data.

Implements itk::FiniteDifferenceFunction< TDisplacementField >.

SetIntensityDifferenceThreshold()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

virtual void itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetIntensityDifferenceThreshold ( double )

virtual

Set/Get the threshold below which the absolute difference of intensity yields a match. When the intensities match between a moving and fixed image pixel, the update vector (for that iteration) will be the zero vector. Default is 0.001.

SetMovingImageInterpolator()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

void itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetMovingImageInterpolator ( InterpolatorType * ptr )

inline

Set the moving image interpolator.

Definition at line 131 of file itkGPUDemonsRegistrationFunction.h.

SetUseMovingImageGradient()

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

virtual void itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetUseMovingImageGradient ( bool flag )

inlinevirtual

Select if the fixed image or moving image gradient is used for computing the demon forces. The fixed image gradient is used by default.

Definition at line 218 of file itkGPUDemonsRegistrationFunction.h.

Member Data Documentation

ImageDimension

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

unsigned int itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ImageDimension = Superclass::ImageDimension

staticconstexpr

Inherit some enums from the superclass.

Definition at line 92 of file itkGPUDemonsRegistrationFunction.h.

m_ComputeUpdateGPUKernelHandle

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

int itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_ComputeUpdateGPUKernelHandle {}

protected

Definition at line 259 of file itkGPUDemonsRegistrationFunction.h.

m_DenominatorThreshold

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

double itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_DenominatorThreshold {}

private

Threshold below which the denominator term is considered zero.

Definition at line 282 of file itkGPUDemonsRegistrationFunction.h.

m_FixedImageGradientCalculator

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

GradientCalculatorPointer itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_FixedImageGradientCalculator {}

private

Function to compute derivatives of the fixed image.

Definition at line 269 of file itkGPUDemonsRegistrationFunction.h.

m_GPUPixelCounter

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

GPUReduction<int>::Pointer itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_GPUPixelCounter {}

mutableprivate

Definition at line 296 of file itkGPUDemonsRegistrationFunction.h.

m_GPUSquaredChange

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

GPUReduction<float>::Pointer itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_GPUSquaredChange {}

mutableprivate

Definition at line 297 of file itkGPUDemonsRegistrationFunction.h.

m_GPUSquaredDifference

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

GPUReduction<float>::Pointer itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_GPUSquaredDifference {}

mutableprivate

Definition at line 298 of file itkGPUDemonsRegistrationFunction.h.

m_IntensityDifferenceThreshold

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

double itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_IntensityDifferenceThreshold {}

private

Threshold below which two intensity value are assumed to match.

Definition at line 285 of file itkGPUDemonsRegistrationFunction.h.

m_Metric

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

double itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_Metric {}

mutableprivate

The metric value is the mean square difference in intensity between the fixed image and transforming moving image computed over the the overlapping region between the two images.

Definition at line 290 of file itkGPUDemonsRegistrationFunction.h.

m_MetricCalculationMutex

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

std::mutex itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MetricCalculationMutex {}

mutableprivate

Mutex lock to protect modification to metric.

Definition at line 301 of file itkGPUDemonsRegistrationFunction.h.

m_MovingImageGradientCalculator

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

MovingImageGradientCalculatorPointer itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MovingImageGradientCalculator {}

private

Function to compute derivatives of the moving image.

Definition at line 272 of file itkGPUDemonsRegistrationFunction.h.

m_MovingImageInterpolator

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

InterpolatorPointer itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MovingImageInterpolator {}

private

Function to interpolate the moving image.

Definition at line 276 of file itkGPUDemonsRegistrationFunction.h.

m_Normalizer

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

double itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_Normalizer {}

private

Definition at line 266 of file itkGPUDemonsRegistrationFunction.h.

m_NumberOfPixelsProcessed

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

SizeValueType itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_NumberOfPixelsProcessed {}

mutableprivate

Definition at line 292 of file itkGPUDemonsRegistrationFunction.h.

m_RMSChange

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

double itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_RMSChange {}

mutableprivate

Definition at line 293 of file itkGPUDemonsRegistrationFunction.h.

m_SumOfSquaredChange

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

double itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_SumOfSquaredChange {}

mutableprivate

Definition at line 294 of file itkGPUDemonsRegistrationFunction.h.

m_SumOfSquaredDifference

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

double itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_SumOfSquaredDifference {}

mutableprivate

Definition at line 291 of file itkGPUDemonsRegistrationFunction.h.

m_TimeStep

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

TimeStepType itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_TimeStep {}

private

The global timestep.

Definition at line 279 of file itkGPUDemonsRegistrationFunction.h.

m_UseMovingImageGradient

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

bool itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_UseMovingImageGradient {}

private

Definition at line 273 of file itkGPUDemonsRegistrationFunction.h.

m_ZeroUpdateReturn

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>

PixelType itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_ZeroUpdateReturn {}

private

Cache fixed image information.

Definition at line 265 of file itkGPUDemonsRegistrationFunction.h.

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The documentation for this class was generated from the following file:

• itkGPUDemonsRegistrationFunction.h