#include <itkKappaStatisticImageToImageMetric.h>

Detailed Description

template<typename TFixedImage, typename TMovingImage>
class itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >

Computes similarity between two binary objects to be registered.

This Class is templated over the type of the fixed and moving images to be compared. The metric here is designed for matching pixels in two images with the same exact value. Only one value can be considered (the default is 255) and can be specified with the SetForegroundValue method. In the computation of the metric, only foreground pixels are considered. The metric value is given by 2*|A&B|/(|A|+|B|), where A is the foreground region in the moving image, B is the foreground region in the fixed image, & is intersection, and |.| indicates the area of the enclosed set. The metric is described in "Morphometric Analysis of White Matter Lesions in MR Images: Method and Validation", A. P. Zijdenbos, B. M. Dawant, R. A. Margolin, A. C. Palmer.

This metric is especially useful when considering the similarity between binary images. Given the nature of binary images, a nearest neighbor interpolator is the preferred interpolator.

Metric values range from 0.0 (no foreground alignment) to 1.0 (perfect foreground alignment). When dealing with optimizers that can only minimize a metric, use the ComplementOn() method.

Definition at line 54 of file itkKappaStatisticImageToImageMetric.h.

Inheritance diagram for itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >:

Collaboration diagram for itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >:

Public Types
using	ConstPointer = SmartPointer<const Self>

using	DerivativeType

using	FixedImageConstPointer

using	FixedImageRegionType

using	FixedImageType

using	GradientImageType

using	GradientPixelType

using	InputPointType

using	MeasureType

using	MovingImageConstPointer

using	MovingImageType

using	OutputPointType

using	Pointer = SmartPointer<Self>

using	RealType

using	Self = KappaStatisticImageToImageMetric

using	Superclass = ImageToImageMetric<TFixedImage, TMovingImage>

using	TransformJacobianType

using	TransformParametersType

using	TransformPointer

using	TransformType

Public Types inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
using	ConstPointer = SmartPointer<const Self>

using	CoordinateRepresentationType = typename Superclass::ParametersValueType

using	DerivativeType

using	FixedImageConstPointer = typename FixedImageType::ConstPointer

using	FixedImageIndexContainer = std::vector<FixedImageIndexType>

using	FixedImageIndexType = typename FixedImageType::IndexType

using	FixedImageIndexValueType = typename FixedImageIndexType::IndexValueType

using	FixedImageMaskConstPointer = typename FixedImageMaskType::ConstPointer

using	FixedImageMaskPointer = typename FixedImageMaskType::Pointer

using	FixedImageMaskType = SpatialObject<Self::FixedImageDimension>

using	FixedImagePixelType = typename TFixedImage::PixelType

using	FixedImagePointType = typename TransformType::InputPointType

using	FixedImageRegionType = typename FixedImageType::RegionType

using	FixedImageType = TFixedImage

using	GradientImageFilterPointer = typename GradientImageFilterType::Pointer

using	GradientImageFilterType = GradientRecursiveGaussianImageFilter<MovingImageType, GradientImageType>

using	GradientImagePointer = SmartPointer<GradientImageType>

using	GradientImageType = Image<GradientPixelType, Self::MovingImageDimension>

using	GradientPixelType = CovariantVector<RealType, Self::MovingImageDimension>

using	InputPointType = typename TransformType::InputPointType

using	InterpolatorPointer = typename InterpolatorType::Pointer

using	InterpolatorType = InterpolateImageFunction<MovingImageType, CoordinateRepresentationType>

using	MeasureType

using	MovingImageConstPointer = typename MovingImageType::ConstPointer

using	MovingImageIndexType = typename MovingImageType::IndexType

using	MovingImageMaskConstPointer = typename MovingImageMaskType::ConstPointer

using	MovingImageMaskPointer = typename MovingImageMaskType::Pointer

using	MovingImageMaskType = SpatialObject<Self::MovingImageDimension>

using	MovingImagePixelType = typename TMovingImage::PixelType

using	MovingImagePointType = typename TransformType::OutputPointType

using	MovingImageType = TMovingImage

using	MultiThreaderType = MultiThreaderBase

using	OutputPointType = typename TransformType::OutputPointType

using	ParametersType

using	Pointer = SmartPointer<Self>

using	RealType = typename NumericTraits<MovingImagePixelType>::RealType

using	Self = ImageToImageMetric

using	Superclass = SingleValuedCostFunction

using	TransformJacobianType = typename TransformType::JacobianType

using	TransformParametersType = typename TransformType::ParametersType

using	TransformPointer = typename TransformType::Pointer

using	TransformType = Transform<CoordinateRepresentationType, Self::MovingImageDimension, Self::FixedImageDimension>

Public Types inherited from itk::SingleValuedCostFunction
using	ConstPointer = SmartPointer<const Self>

using	DerivativeType = Array<ParametersValueType>

using	MeasureType = double

using	ParametersType = Superclass::ParametersType

using	ParametersValueType = Superclass::ParametersValueType

using	Pointer = SmartPointer<Self>

using	Self = SingleValuedCostFunction

using	Superclass = CostFunction

Public Types inherited from itk::CostFunctionTemplate< double >
using	ConstPointer

using	ParametersType

using	ParametersValueType

using	Pointer

using	Self

using	Superclass

Public Types inherited from itk::Object
using	ConstPointer = SmartPointer<const Self>

using	Pointer = SmartPointer<Self>

using	Self = Object

using	Superclass = LightObject

Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer<const Self>

using	Pointer = SmartPointer<Self>

using	Self = LightObject

Public Member Functions
void	ComputeGradient () override

virtual::itk::LightObject::Pointer	CreateAnother () const

void	GetDerivative (const TransformParametersType &, DerivativeType &derivative) const override

const char *	GetNameOfClass () const override

MeasureType	GetValue (const TransformParametersType &parameters) const override

void	GetValueAndDerivative (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const override


virtual void	SetForegroundValue (RealType _arg)

virtual RealType	GetForegroundValue () const


virtual void	SetComplement (bool _arg)

virtual void	ComplementOn ()

virtual void	ComplementOff ()

virtual bool	GetComplement () const

Public Member Functions inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
virtual const FixedImageRegionType &	GetFixedImageRegion () const

virtual const FixedImagePixelType &	GetFixedImageSamplesIntensityThreshold () const

virtual const GradientImageType *	GetGradientImage () const

virtual const InterpolatorType *	GetInterpolator () const

virtual GradientImageType *	GetModifiableGradientImage ()

virtual InterpolatorType *	GetModifiableInterpolator ()

virtual TransformType *	GetModifiableTransform ()

SizeValueType	GetNumberOfMovingImageSamples ()

unsigned int	GetNumberOfParameters () const override

virtual const SizeValueType &	GetNumberOfPixelsCounted () const

SizeValueType	GetNumberOfSpatialSamples ()

virtual const TransformType *	GetTransform () const

virtual const bool &	GetUseAllPixels () const

virtual const bool &	GetUseFixedImageIndexes () const

virtual const bool &	GetUseFixedImageSamplesIntensityThreshold () const

virtual const bool &	GetUseSequentialSampling () const

virtual void	Initialize ()

virtual void	MultiThreadingInitialize ()

void	SetFixedImageIndexes (const FixedImageIndexContainer &indexes)

virtual void	SetFixedImageRegion (const FixedImageRegionType reg)

void	SetFixedImageSamplesIntensityThreshold (const FixedImagePixelType &thresh)

virtual void	SetInterpolator (InterpolatorType *_arg)

void	SetNumberOfSpatialSamples (SizeValueType num)

virtual void	SetTransform (TransformType *_arg)

void	SetTransformParameters (const ParametersType &parameters) const

void	SetUseAllPixels (bool useAllPixels)

void	SetUseFixedImageIndexes (bool useIndexes)

void	SetUseFixedImageSamplesIntensityThreshold (bool useThresh)

void	SetUseSequentialSampling (bool useSequential)

void	UseAllPixelsOff ()

void	UseAllPixelsOn ()

virtual void	SetFixedImage (const FixedImageType *_arg)

virtual const FixedImageType *	GetFixedImage () const

virtual void	SetMovingImage (const MovingImageType *_arg)

virtual const MovingImageType *	GetMovingImage () const

virtual void	SetMovingImageMask (const MovingImageMaskType *_arg)

virtual const MovingImageMaskType *	GetMovingImageMask () const

virtual void	SetFixedImageMask (const FixedImageMaskType *_arg)

virtual const FixedImageMaskType *	GetFixedImageMask () const

void	SetNumberOfWorkUnits (ThreadIdType numberOfWorkUnits)

virtual const ThreadIdType &	GetNumberOfWorkUnits () const

virtual void	SetComputeGradient (bool _arg)

virtual const bool &	GetComputeGradient () const

virtual void	ComputeGradientOn ()

virtual void	ComputeGradientOff ()

virtual void	SetNumberOfFixedImageSamples (SizeValueType numSamples)

virtual const SizeValueType &	GetNumberOfFixedImageSamples () const

void	ReinitializeSeed ()

void	ReinitializeSeed (int seed)

virtual void	SetUseCachingOfBSplineWeights (bool _arg)

virtual const bool &	GetUseCachingOfBSplineWeights () const

virtual void	UseCachingOfBSplineWeightsOn ()

virtual void	UseCachingOfBSplineWeightsOff ()

virtual MultiThreaderType *	GetModifiableThreader ()

virtual const MultiThreaderType *	GetThreader () const

const TransformPointer *	GetThreaderTransform ()

Public Member Functions inherited from itk::SingleValuedCostFunction
virtual void	GetDerivative (const ParametersType &parameters, DerivativeType &derivative) const =0

const char *	GetNameOfClass () const override

virtual MeasureType	GetValue (const ParametersType &parameters) const =0

virtual void	GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *cmd) const

unsigned long	AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const

LightObject::Pointer	CreateAnother () const override

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary ()

const MetaDataDictionary &	GetMetaDataDictionary () const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

void	Register () const override

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag) const

void	SetDebug (bool debugFlag) const

void	SetReferenceCount (int) override

void	UnRegister () const noexcept override

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

void	SetMetaDataDictionary (MetaDataDictionary &&rrhs)

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
Pointer	Clone () const

virtual void	Delete ()

virtual int	GetReferenceCount () const

void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool val)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Protected Member Functions
	KappaStatisticImageToImageMetric ()

void	PrintSelf (std::ostream &os, Indent indent) const override

	~KappaStatisticImageToImageMetric () override=default

Protected Member Functions inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
virtual void	ComputeImageDerivatives (const MovingImagePointType &mappedPoint, ImageDerivativesType &gradient, ThreadIdType threadId) const

void	GetValueAndDerivativeMultiThreadedInitiate () const

void	GetValueAndDerivativeMultiThreadedPostProcessInitiate () const

virtual void	GetValueAndDerivativeThread (ThreadIdType threadId) const

virtual void	GetValueAndDerivativeThreadPostProcess (ThreadIdType threadId, bool withinSampleThread) const

virtual void	GetValueAndDerivativeThreadPreProcess (ThreadIdType threadId, bool withinSampleThread) const

virtual bool	GetValueAndDerivativeThreadProcessSample (ThreadIdType threadId, SizeValueType fixedImageSample, const MovingImagePointType &mappedPoint, double movingImageValue, const ImageDerivativesType &movingImageGradientValue) const

	ImageToImageMetric ()

virtual void	PreComputeTransformValues ()

virtual void	SampleFixedImageIndexes (FixedImageSampleContainer &samples) const

virtual void	SampleFixedImageRegion (FixedImageSampleContainer &samples) const

virtual void	SampleFullFixedImageRegion (FixedImageSampleContainer &samples) const

virtual void	SynchronizeTransforms () const

virtual void	TransformPoint (unsigned int sampleNumber, MovingImagePointType &mappedPoint, bool &sampleOk, double &movingImageValue, ThreadIdType threadId) const

virtual void	TransformPointWithDerivatives (unsigned int sampleNumber, MovingImagePointType &mappedPoint, bool &sampleOk, double &movingImageValue, ImageDerivativesType &movingImageGradient, ThreadIdType threadId) const

	~ImageToImageMetric () override=default

void	GetValueMultiThreadedInitiate () const

void	GetValueMultiThreadedPostProcessInitiate () const

virtual void	GetValueThread (ThreadIdType threadId) const

virtual void	GetValueThreadPreProcess (ThreadIdType threadId, bool withinSampleThread) const

virtual bool	GetValueThreadProcessSample (ThreadIdType threadId, SizeValueType fixedImageSample, const MovingImagePointType &mappedPoint, double movingImageValue) const

virtual void	GetValueThreadPostProcess (ThreadIdType threadId, bool withinSampleThread) const

Protected Member Functions inherited from itk::SingleValuedCostFunction
	SingleValuedCostFunction ()=default

	~SingleValuedCostFunction () override

Protected Member Functions inherited from itk::CostFunctionTemplate< double >
	CostFunctionTemplate ()=default

	CostFunctionTemplate ()=default

	~CostFunctionTemplate () override=default

	~CostFunctionTemplate () override=default

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	SetTimeStamp (const TimeStamp &timeStamp)

	~Object () override

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Private Attributes
bool	m_Complement { false }

RealType	m_ForegroundValue {}

Additional Inherited Members
Static Public Attributes inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
static constexpr unsigned int	FixedImageDimension = TFixedImage::ImageDimension

static constexpr unsigned int	MovingImageDimension = TMovingImage::ImageDimension

Protected Types inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
using	BooleanArrayType = std::vector<bool>

using	BSplineInterpolatorType = BSplineInterpolateImageFunction<MovingImageType, CoordinateRepresentationType>

using	BSplineParametersOffsetType = FixedArray<SizeValueType, FixedImageType::ImageDimension>

using	BSplineTransformIndexArrayType = typename BSplineTransformType::ParameterIndexArrayType

using	BSplineTransformIndicesArrayType = Array2D<IndexValueType>

using	BSplineTransformType

using	BSplineTransformWeightsArrayType = Array2D<WeightsValueType>

using	BSplineTransformWeightsType = typename BSplineTransformType::WeightsType

using	DerivativeFunctionType = CentralDifferenceImageFunction<MovingImageType, CoordinateRepresentationType>

using	FixedImageSampleContainer = std::vector<FixedImageSamplePoint>

using	ImageDerivativesType = CovariantVector<double, Self::MovingImageDimension>

using	IndexValueType = typename BSplineTransformIndexArrayType::ValueType

using	MovingImagePointArrayType = std::vector<MovingImagePointType>

using	WeightsValueType = typename BSplineTransformWeightsType::ValueType

Static Protected Member Functions inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueAndDerivativeMultiThreaded (void *workunitInfoAsVoid)

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueAndDerivativeMultiThreadedPostProcess (void *workunitInfoAsVoid)

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueMultiThreaded (void *workunitInfoAsVoid)

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueMultiThreadedPostProcess (void *workunitInfoAsVoid)

Protected Attributes inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
BSplineInterpolatorType::Pointer	m_BSplineInterpolator {}

BSplineParametersOffsetType	m_BSplineParametersOffset {}

MovingImagePointArrayType	m_BSplinePreTransformPointsArray {}

BSplineTransformType::Pointer	m_BSplineTransform {}

BSplineTransformIndexArrayType	m_BSplineTransformIndices {}

BSplineTransformIndicesArrayType	m_BSplineTransformIndicesArray {}

BSplineTransformWeightsType	m_BSplineTransformWeights {}

BSplineTransformWeightsArrayType	m_BSplineTransformWeightsArray {}

bool	m_ComputeGradient { true }

DerivativeFunctionType::Pointer	m_DerivativeCalculator {}

FixedImageConstPointer	m_FixedImage {}

FixedImageIndexContainer	m_FixedImageIndexes {}

FixedImageMaskConstPointer	m_FixedImageMask {}

FixedImageSampleContainer	m_FixedImageSamples {}

FixedImagePixelType	m_FixedImageSamplesIntensityThreshold {}

GradientImagePointer	m_GradientImage {}

InterpolatorPointer	m_Interpolator {}

MovingImageConstPointer	m_MovingImage {}

MovingImageMaskConstPointer	m_MovingImageMask {}

SizeValueType	m_NumberOfFixedImageSamples { 50000 }

SizeValueType	m_NumberOfParameters { 0 }

SizeValueType	m_NumberOfPixelsCounted { 0 }

ThreadIdType	m_NumberOfWorkUnits { 1 }

SizeValueType	m_NumBSplineWeights { 0 }

int	m_RandomSeed {}

bool	m_ReseedIterator { false }

std::unique_ptr< BSplineTransformIndexArrayType[]>	m_ThreaderBSplineTransformIndices

std::unique_ptr< BSplineTransformWeightsType[]>	m_ThreaderBSplineTransformWeights

std::unique_ptr< TransformPointer[]>	m_ThreaderTransform

TransformPointer	m_Transform {}

bool	m_UseAllPixels { false }

bool	m_UseCachingOfBSplineWeights { true }

bool	m_UseFixedImageIndexes { false }

bool	m_UseFixedImageSamplesIntensityThreshold { false }

bool	m_UseSequentialSampling { false }

BooleanArrayType	m_WithinBSplineSupportRegionArray {}

MultiThreaderType::Pointer	m_Threader {}

std::unique_ptr< ConstantPointerWrapper >	m_ConstSelfWrapper

std::unique_ptr< unsigned int[]>	m_ThreaderNumberOfMovingImageSamples

bool	m_WithinThreadPreProcess { false }

bool	m_WithinThreadPostProcess { false }

Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount {}

Static Protected Attributes inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
static constexpr unsigned int	DeformationSplineOrder = 3

Member Typedef Documentation

◆ ConstPointer

template<typename TFixedImage, typename TMovingImage>

using itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::ConstPointer = SmartPointer<const Self>

Definition at line 63 of file itkKappaStatisticImageToImageMetric.h.

◆ DerivativeType

template<typename TFixedImage, typename TMovingImage>

using itk::SingleValuedCostFunction::DerivativeType

DerivativeType type alias. It defines a type used to return the cost function derivative.

Definition at line 133 of file itkSingleValuedCostFunction.h.

◆ FixedImageConstPointer

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::FixedImageConstPointer

Definition at line 79 of file itkImageToImageMetric.h.

◆ FixedImageRegionType

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::FixedImageRegionType

Definition at line 80 of file itkImageToImageMetric.h.

◆ FixedImageType

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::FixedImageType

Type of the fixed Image.

Definition at line 77 of file itkImageToImageMetric.h.

◆ GradientImageType

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::GradientImageType

Definition at line 110 of file itkImageToImageMetric.h.

◆ GradientPixelType

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::GradientPixelType

Definition at line 109 of file itkImageToImageMetric.h.

◆ InputPointType

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::InputPointType

Definition at line 90 of file itkImageToImageMetric.h.

◆ MeasureType

template<typename TFixedImage, typename TMovingImage>

using itk::SingleValuedCostFunction::MeasureType

MeasureType type alias. It defines a type used to return the cost function value.

Definition at line 130 of file itkSingleValuedCostFunction.h.

◆ MovingImageConstPointer

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::MovingImageConstPointer

Definition at line 74 of file itkImageToImageMetric.h.

◆ MovingImageType

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::MovingImageType

Type of the moving Image.

Definition at line 72 of file itkImageToImageMetric.h.

◆ OutputPointType

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::OutputPointType

Definition at line 91 of file itkImageToImageMetric.h.

◆ Pointer

template<typename TFixedImage, typename TMovingImage>

using itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::Pointer = SmartPointer<Self>

Definition at line 62 of file itkKappaStatisticImageToImageMetric.h.

◆ RealType

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::RealType

Gaussian filter to compute the gradient of the Moving Image

Definition at line 108 of file itkImageToImageMetric.h.

◆ Self

template<typename TFixedImage, typename TMovingImage>

using itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::Self = KappaStatisticImageToImageMetric

Standard class type aliases.

Definition at line 60 of file itkKappaStatisticImageToImageMetric.h.

◆ Superclass

template<typename TFixedImage, typename TMovingImage>

using itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::Superclass = ImageToImageMetric<TFixedImage, TMovingImage>

Definition at line 61 of file itkKappaStatisticImageToImageMetric.h.

◆ TransformJacobianType

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::TransformJacobianType

Definition at line 93 of file itkImageToImageMetric.h.

◆ TransformParametersType

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::TransformParametersType

Definition at line 92 of file itkImageToImageMetric.h.

◆ TransformPointer

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::TransformPointer

Definition at line 89 of file itkImageToImageMetric.h.

◆ TransformType

template<typename TFixedImage, typename TMovingImage>

using itk::ImageToImageMetric< TFixedImage, TMovingImage >::TransformType

Type of the Transform Base class

Definition at line 87 of file itkImageToImageMetric.h.

Constructor & Destructor Documentation

◆ KappaStatisticImageToImageMetric()

template<typename TFixedImage, typename TMovingImage>

itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::KappaStatisticImageToImageMetric ( )

protected

Referenced by GetNameOfClass().

◆ ~KappaStatisticImageToImageMetric()

template<typename TFixedImage, typename TMovingImage>

itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::~KappaStatisticImageToImageMetric ( )

overrideprotecteddefault

Member Function Documentation

◆ ComplementOff()

template<typename TFixedImage, typename TMovingImage>

virtual void itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::ComplementOff ( )

virtual

Set/Get whether this metric returns 2*|A&B|/(|A|+|B|) (ComplementOff, the default) or 1.0 - 2*|A&B|/(|A|+|B|) (ComplementOn). When using an optimizer that minimizes metric values use ComplementOn().

◆ ComplementOn()

template<typename TFixedImage, typename TMovingImage>

virtual void itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::ComplementOn ( )

virtual

Set/Get whether this metric returns 2*|A&B|/(|A|+|B|) (ComplementOff, the default) or 1.0 - 2*|A&B|/(|A|+|B|) (ComplementOn). When using an optimizer that minimizes metric values use ComplementOn().

◆ ComputeGradient()

template<typename TFixedImage, typename TMovingImage>

void itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::ComputeGradient ( )

overridevirtual

Computes the gradient image and assigns it to m_GradientImage

Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.

◆ CreateAnother()

template<typename TFixedImage, typename TMovingImage>

virtual::itk::LightObject::Pointer itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::CreateAnother ( ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

◆ GetComplement()

template<typename TFixedImage, typename TMovingImage>

virtual bool itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::GetComplement ( ) const

virtual

Set/Get whether this metric returns 2*|A&B|/(|A|+|B|) (ComplementOff, the default) or 1.0 - 2*|A&B|/(|A|+|B|) (ComplementOn). When using an optimizer that minimizes metric values use ComplementOn().

◆ GetDerivative()

template<typename TFixedImage, typename TMovingImage>

void itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::GetDerivative	(	const TransformParametersType &	,
		DerivativeType &	derivative ) const

override

Get the derivatives of the match measure.

◆ GetForegroundValue()

template<typename TFixedImage, typename TMovingImage>

virtual RealType itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::GetForegroundValue ( ) const

virtual

This method allows the user to set the foreground value. The default value is 255.

◆ GetNameOfClass()

template<typename TFixedImage, typename TMovingImage>

const char * itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::GetNameOfClass ( ) const

overridevirtual

See also: LightObject::GetNameOfClass()

Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.

References KappaStatisticImageToImageMetric().

◆ GetValue()

template<typename TFixedImage, typename TMovingImage>

MeasureType itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::GetValue ( const TransformParametersType & parameters ) const

override

Get the value of the metric at a particular parameter setting. The metric value is given by 2*|A&B|/(|A|+|B|), where A is the moving image, B is the fixed image, & is intersection, and |.| indicates the area of the enclosed set. If ComplementOn has been set, the metric value is 1.0-2*|A&B|/(|A|+|B|).

◆ GetValueAndDerivative()

template<typename TFixedImage, typename TMovingImage>

void itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::GetValueAndDerivative	(	const TransformParametersType &	parameters,
		MeasureType &	Value,
		DerivativeType &	Derivative ) const

override

Get both the value and derivative. This method internally calls the GetValue() and the GetDerivative() method.

◆ New()

template<typename TFixedImage, typename TMovingImage>

static Pointer itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::New ( )

static

Method for creation through the object factory.

◆ PrintSelf()

template<typename TFixedImage, typename TMovingImage>

void itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent ) const

overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.

◆ SetComplement()

template<typename TFixedImage, typename TMovingImage>

virtual void itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::SetComplement ( bool _arg )

virtual

Set/Get whether this metric returns 2*|A&B|/(|A|+|B|) (ComplementOff, the default) or 1.0 - 2*|A&B|/(|A|+|B|) (ComplementOn). When using an optimizer that minimizes metric values use ComplementOn().

◆ SetForegroundValue()

template<typename TFixedImage, typename TMovingImage>

virtual void itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::SetForegroundValue ( RealType _arg )

virtual

This method allows the user to set the foreground value. The default value is 255.

Member Data Documentation

◆ m_Complement

template<typename TFixedImage, typename TMovingImage>

bool itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::m_Complement { false }

private

Definition at line 136 of file itkKappaStatisticImageToImageMetric.h.

◆ m_ForegroundValue

template<typename TFixedImage, typename TMovingImage>

RealType itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >::m_ForegroundValue {}

private

Definition at line 135 of file itkKappaStatisticImageToImageMetric.h.

The documentation for this class was generated from the following file:

itkKappaStatisticImageToImageMetric.h

Detailed Description

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Private Attributes

Additional Inherited Members

Member Typedef Documentation

◆ ConstPointer

◆ DerivativeType

◆ FixedImageConstPointer

◆ FixedImageRegionType

◆ FixedImageType

◆ GradientImageType

◆ GradientPixelType

◆ InputPointType

◆ MeasureType

◆ MovingImageConstPointer

◆ MovingImageType

◆ OutputPointType

◆ Pointer

◆ RealType

◆ Self

◆ Superclass

◆ TransformJacobianType

◆ TransformParametersType

◆ TransformPointer

◆ TransformType

Constructor & Destructor Documentation

◆ KappaStatisticImageToImageMetric()

◆ ~KappaStatisticImageToImageMetric()

Member Function Documentation

◆ ComplementOff()

◆ ComplementOn()

◆ ComputeGradient()

◆ CreateAnother()

◆ GetComplement()

◆ GetDerivative()

◆ GetForegroundValue()

◆ GetNameOfClass()

◆ GetValue()

◆ GetValueAndDerivative()

◆ New()

◆ PrintSelf()

◆ SetComplement()

◆ SetForegroundValue()

Member Data Documentation

◆ m_Complement

◆ m_ForegroundValue