ITK
6.0.0
Insight Toolkit
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#include <itkImage.h>
Templated n-dimensional image class.
Images are templated over a pixel type (modeling the dependent variables), and a dimension (number of independent variables). The container for the pixel data is the ImportImageContainer.
Within the pixel container, images are modeled as arrays, defined by a start index and a size.
The superclass of Image, ImageBase, defines the geometry of the image in terms of where the image sits in physical space, how the image is oriented in physical space, the size of a pixel, and the extent of the image itself. ImageBase provides the methods to convert between the index and physical space coordinate frames.
Pixels can be accessed directly using the SetPixel() and GetPixel() methods or can be accessed via iterators that define the region of the image they traverse.
The pixel type may be one of the native types; a Insight-defined class type such as Vector; or a user-defined type. Note that depending on the type of pixel that you use, the process objects (i.e., those filters processing data objects) may not operate on the image and/or pixel type. This becomes apparent at compile-time because operator overloading (for the pixel type) is not supported.
The data in an image is arranged in a 1D array as [][][][slice][row][col] with the column index varying most rapidly. The Index type reverses the order so that with Index[0] = col, Index[1] = row, Index[2] = slice, ...
Definition at line 88 of file itkImage.h.
Classes | |
struct | Rebind |
Public Member Functions | |
void | Allocate (bool initializePixels=false) override |
void | FillBuffer (const TPixel &value) |
const char * | GetNameOfClass () const override |
NeighborhoodAccessorFunctorType | GetNeighborhoodAccessor () |
const NeighborhoodAccessorFunctorType | GetNeighborhoodAccessor () const |
unsigned int | GetNumberOfComponentsPerPixel () const override |
TPixel & | GetPixel (const IndexType &index) |
const TPixel & | GetPixel (const IndexType &index) const |
AccessorType | GetPixelAccessor () |
const AccessorType | GetPixelAccessor () const |
PixelContainer * | GetPixelContainer () |
const PixelContainer * | GetPixelContainer () const |
virtual void | Graft (const Self *image) |
void | Initialize () override |
TPixel & | operator[] (const IndexType &index) |
const TPixel & | operator[] (const IndexType &index) const |
void | SetPixel (const IndexType &index, const TPixel &value) |
void | SetPixelContainer (PixelContainer *container) |
virtual TPixel * | GetBufferPointer () |
virtual const TPixel * | GetBufferPointer () const |
Public Member Functions inherited from itk::ImageBase< 2 > | |
virtual void | Allocate (bool initialize=false) |
void | AllocateInitialized () |
OffsetValueType | ComputeOffset (const IndexType &ind) const |
void | CopyInformation (const DataObject *data) override |
virtual const RegionType & | GetBufferedRegion () const |
virtual const DirectionType & | GetDirection () const |
virtual const DirectionType & | GetInverseDirection () const |
virtual const RegionType & | GetLargestPossibleRegion () const |
const char * | GetNameOfClass () const override |
virtual const PointType & | GetOrigin () const |
virtual const RegionType & | GetRequestedRegion () const |
virtual const SpacingType & | GetSpacing () const |
virtual void | Graft (const Self *image) |
void | Initialize () override |
bool | IsCongruentImageGeometry (const ImageBase *otherImage, double coordinateTolerance, double directionTolerance) const |
bool | IsSameImageGeometryAs (const ImageBase *otherImage, double coordinateTolerance=DefaultImageCoordinateTolerance, double directionTolerance=DefaultImageDirectionTolerance) const |
bool | RequestedRegionIsOutsideOfTheBufferedRegion () override |
virtual void | SetBufferedRegion (const RegionType ®ion) |
virtual void | SetDirection (const DirectionType &direction) |
virtual void | SetLargestPossibleRegion (const RegionType ®ion) |
virtual void | SetRegions (const SizeType &size) |
void | SetRequestedRegion (const DataObject *data) override |
virtual void | SetRequestedRegion (const RegionType ®ion) |
void | SetRequestedRegionToLargestPossibleRegion () override |
void | TransformLocalVectorToPhysicalVector (const FixedArray< TCoordRep, VImageDimension > &inputGradient, FixedArray< TCoordRep, VImageDimension > &outputGradient) const |
ContinuousIndex< TIndexRep, VImageDimension > | TransformPhysicalPointToContinuousIndex (const Point< TCoordRep, VImageDimension > &point) const |
bool | TransformPhysicalPointToContinuousIndex (const Point< TCoordRep, VImageDimension > &point, ContinuousIndex< TIndexRep, VImageDimension > &index) const |
bool | TransformPhysicalPointToIndex (const Point< TCoordRep, VImageDimension > &point, IndexType &index) const |
void | TransformPhysicalVectorToLocalVector (const FixedArray< TCoordRep, VImageDimension > &inputGradient, FixedArray< TCoordRep, VImageDimension > &outputGradient) const |
void | UpdateOutputData () override |
void | UpdateOutputInformation () override |
bool | VerifyRequestedRegion () override |
virtual void | SetOrigin (PointType _arg) |
virtual void | SetOrigin (const double origin[VImageDimension]) |
virtual void | SetOrigin (const float origin[VImageDimension]) |
virtual void | SetRegions (const RegionType ®ion) |
const OffsetValueType * | GetOffsetTable () const |
IndexType | ComputeIndex (OffsetValueType offset) const |
virtual void | SetSpacing (const SpacingType &spacing) |
virtual void | SetSpacing (const double spacing[VImageDimension]) |
virtual void | SetSpacing (const float spacing[VImageDimension]) |
IndexType | TransformPhysicalPointToIndex (const Point< TCoordRep, VImageDimension > &point) const |
void | TransformContinuousIndexToPhysicalPoint (const ContinuousIndex< TIndexRep, VImageDimension > &index, Point< TCoordRep, VImageDimension > &point) const |
Point< TCoordRep, VImageDimension > | TransformContinuousIndexToPhysicalPoint (const ContinuousIndex< TIndexRep, VImageDimension > &index) const |
void | TransformIndexToPhysicalPoint (const IndexType &index, Point< TCoordRep, VImageDimension > &point) const |
Point< TCoordRep, VImageDimension > | TransformIndexToPhysicalPoint (const IndexType &index) const |
TVector | TransformLocalVectorToPhysicalVector (const TVector &inputGradient) const |
TVector | TransformPhysicalVectorToLocalVector (const TVector &inputGradient) const |
virtual void | SetNumberOfComponentsPerPixel (unsigned int) |
Public Member Functions inherited from itk::DataObject | |
virtual void | CopyInformation (const DataObject *) |
virtual void | DataHasBeenGenerated () |
void | DisconnectPipeline () |
bool | GetDataReleased () const |
const char * | GetNameOfClass () const override |
virtual const bool & | GetReleaseDataFlag () const |
SmartPointer< ProcessObject > | GetSource () const |
DataObjectPointerArraySizeType | GetSourceOutputIndex () const |
const DataObjectIdentifierType & | GetSourceOutputName () const |
virtual ModifiedTimeType | GetUpdateMTime () const |
virtual void | Graft (const DataObject *) |
virtual void | Initialize () |
virtual void | PrepareForNewData () |
virtual void | PropagateRequestedRegion () |
void | ReleaseData () |
virtual void | ReleaseDataFlagOn () |
virtual bool | RequestedRegionIsOutsideOfTheBufferedRegion () |
virtual void | ResetPipeline () |
void | SetReleaseDataFlag (bool flag) |
virtual void | SetRequestedRegion (const DataObject *) |
virtual void | SetRequestedRegionToLargestPossibleRegion () |
bool | ShouldIReleaseData () const |
virtual void | Update () |
virtual void | UpdateOutputData () |
virtual void | UpdateOutputInformation () |
void | UpdateSource () const |
virtual bool | VerifyRequestedRegion () |
void | SetPipelineMTime (ModifiedTimeType time) |
virtual const ModifiedTimeType & | GetPipelineMTime () const |
virtual void | SetRealTimeStamp (RealTimeStamp _arg) |
virtual const RealTimeStamp & | GetRealTimeStamp () const |
Public Member Functions inherited from itk::Object | |
unsigned long | AddObserver (const EventObject &event, Command *cmd) const |
unsigned long | AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const |
LightObject::Pointer | CreateAnother () const override |
virtual void | DebugOff () const |
virtual void | DebugOn () const |
Command * | GetCommand (unsigned long tag) |
bool | GetDebug () const |
MetaDataDictionary & | GetMetaDataDictionary () |
const MetaDataDictionary & | GetMetaDataDictionary () const |
virtual ModifiedTimeType | GetMTime () const |
const char * | GetNameOfClass () const override |
virtual const TimeStamp & | GetTimeStamp () const |
bool | HasObserver (const EventObject &event) const |
void | InvokeEvent (const EventObject &) |
void | InvokeEvent (const EventObject &) const |
virtual void | Modified () const |
void | Register () const override |
void | RemoveAllObservers () |
void | RemoveObserver (unsigned long tag) const |
void | SetDebug (bool debugFlag) const |
void | SetReferenceCount (int) override |
void | UnRegister () const noexcept override |
void | SetMetaDataDictionary (const MetaDataDictionary &rhs) |
void | SetMetaDataDictionary (MetaDataDictionary &&rrhs) |
virtual void | SetObjectName (std::string _arg) |
virtual const std::string & | GetObjectName () const |
Public Member Functions inherited from itk::LightObject | |
Pointer | Clone () const |
virtual Pointer | CreateAnother () const |
virtual void | Delete () |
virtual const char * | GetNameOfClass () const |
virtual int | GetReferenceCount () const |
void | Print (std::ostream &os, Indent indent=0) const |
virtual void | Register () const |
virtual void | SetReferenceCount (int) |
virtual void | UnRegister () const noexcept |
Static Public Member Functions | |
static Pointer | New () |
Static Public Member Functions inherited from itk::ImageBase< 2 > | |
static constexpr unsigned int | GetImageDimension () |
static Pointer | New () |
Static Public Member Functions inherited from itk::DataObject | |
static bool | GetGlobalReleaseDataFlag () |
static void | GlobalReleaseDataFlagOff () |
static void | GlobalReleaseDataFlagOn () |
static Pointer | New () |
static void | SetGlobalReleaseDataFlag (bool val) |
Static Public Member Functions inherited from itk::Object | |
static bool | GetGlobalWarningDisplay () |
static void | GlobalWarningDisplayOff () |
static void | GlobalWarningDisplayOn () |
static Pointer | New () |
static void | SetGlobalWarningDisplay (bool val) |
Static Public Member Functions inherited from itk::LightObject | |
static void | BreakOnError () |
static Pointer | New () |
Protected Member Functions | |
void | ComputeIndexToPhysicalPointMatrices () override |
void | Graft (const DataObject *data) override |
Image ()=default | |
void | PrintSelf (std::ostream &os, Indent indent) const override |
~Image () override=default | |
Protected Member Functions inherited from itk::ImageBase< 2 > | |
virtual void | ComputeIndexToPhysicalPointMatrices () |
void | ComputeOffsetTable () |
void | Graft (const DataObject *data) override |
ImageBase ()=default | |
virtual void | InitializeBufferedRegion () |
void | PrintSelf (std::ostream &os, Indent indent) const override |
~ImageBase () override=default | |
OffsetValueType | FastComputeOffset (const IndexType &ind) const |
IndexType | FastComputeIndex (OffsetValueType offset) const |
Protected Member Functions inherited from itk::DataObject | |
DataObject () | |
void | PrintSelf (std::ostream &os, Indent indent) const override |
virtual void | PropagateResetPipeline () |
~DataObject () override | |
Protected Member Functions inherited from itk::Object | |
Object () | |
bool | PrintObservers (std::ostream &os, Indent indent) const |
void | PrintSelf (std::ostream &os, Indent indent) const override |
virtual void | SetTimeStamp (const TimeStamp &timeStamp) |
~Object () override | |
Protected Member Functions inherited from itk::LightObject | |
virtual LightObject::Pointer | InternalClone () const |
LightObject () | |
virtual void | PrintHeader (std::ostream &os, Indent indent) const |
virtual void | PrintSelf (std::ostream &os, Indent indent) const |
virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
virtual | ~LightObject () |
Private Attributes | |
PixelContainerPointer | m_Buffer { PixelContainer::New() } |
Friends | |
template<typename TEqualityComparable > | |
std::enable_if_t< std::is_same_v< TEqualityComparable, TPixel >, bool > | operator!= (const Image< TEqualityComparable, VImageDimension > &lhs, const Image< TEqualityComparable, VImageDimension > &rhs) |
template<typename TEqualityComparable > | |
std::enable_if_t< std::is_same_v< TEqualityComparable, TPixel >, bool > | operator== (const Image< TEqualityComparable, VImageDimension > &lhs, const Image< TEqualityComparable, VImageDimension > &rhs) |
Additional Inherited Members | |
Static Public Attributes inherited from itk::ImageBase< 2 > | |
static constexpr ImageDimensionType | ImageDimension |
Protected Attributes inherited from itk::ImageBase< 2 > | |
SpacingType | m_Spacing |
PointType | m_Origin |
DirectionType | m_Direction |
DirectionType | m_InverseDirection |
DirectionType | m_IndexToPhysicalPoint |
DirectionType | m_PhysicalPointToIndex |
Protected Attributes inherited from itk::LightObject | |
std::atomic< int > | m_ReferenceCount {} |
using itk::Image< TPixel, VImageDimension >::AccessorFunctorType = DefaultPixelAccessorFunctor<Self> |
Definition at line 124 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::AccessorType = DefaultPixelAccessor<PixelType> |
Accessor type that convert data between internal and external representations.
Definition at line 123 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::ConstPointer = SmartPointer<const Self> |
Definition at line 97 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::ConstWeakPointer = WeakPointer<const Self> |
Definition at line 98 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::InternalPixelType = TPixel |
Internal Pixel representation. Used to maintain a uniform API with Image Adaptors and allow to keep a particular internal representation of data while showing a different external representation.
Definition at line 117 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::IOPixelType = PixelType |
Definition at line 119 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::NeighborhoodAccessorFunctorType = NeighborhoodAccessorFunctor<Self> |
Typedef for the functor used to access a neighborhood of pixel pointers.
Definition at line 128 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::PixelContainer = ImportImageContainer<SizeValueType, PixelType> |
Container used to store pixels in the image.
Definition at line 145 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::PixelContainerConstPointer = typename PixelContainer::ConstPointer |
Definition at line 165 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::PixelContainerPointer = typename PixelContainer::Pointer |
A pointer to the pixel container.
Definition at line 164 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::PixelType = TPixel |
Pixel type alias support. Used to declare pixel type in filters or other operations.
Definition at line 108 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::Pointer = SmartPointer<Self> |
Definition at line 96 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::RebindImageType = itk::Image<UPixelType, VUImageDimension> |
Definition at line 184 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::Self = Image |
Standard class type aliases
Definition at line 94 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::Superclass = ImageBase<VImageDimension> |
Definition at line 95 of file itkImage.h.
using itk::Image< TPixel, VImageDimension >::ValueType = TPixel |
Typedef alias for PixelType
Definition at line 111 of file itkImage.h.
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protecteddefault |
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overrideprotecteddefault |
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Allocate the image memory. The size of the image must already be set, e.g. by calling SetRegions().
Reimplemented from itk::ImageBase< 2 >.
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overrideprotectedvirtual |
Compute helper matrices used to transform Index coordinates to PhysicalPoint coordinates and back. This method is virtual and will be overloaded in derived classes in order to provide backward compatibility behavior in classes that did not used to take image orientation into account.
Reimplemented from itk::ImageBase< 2 >.
void itk::Image< TPixel, VImageDimension >::FillBuffer | ( | const TPixel & | value | ) |
Fill the image buffer with a value. Be sure to call Allocate() first.
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inlinevirtual |
Return a pointer to the beginning of the buffer. This is used by the image iterator class.
Reimplemented in itk::GPUImage< TPixel, VImageDimension >.
Definition at line 251 of file itkImage.h.
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inlinevirtual |
Return a pointer to the beginning of the buffer. This is used by the image iterator class.
Reimplemented in itk::GPUImage< TPixel, VImageDimension >.
Definition at line 256 of file itkImage.h.
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overridevirtual |
Reimplemented from itk::DataObject.
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inline |
Return the NeighborhoodAccessor functor
Definition at line 309 of file itkImage.h.
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Return the NeighborhoodAccessor functor
Definition at line 316 of file itkImage.h.
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overridevirtual |
INTERNAL This method is used internally by filters to copy meta-data from the output to the input. Users should not have a need to use this method.
Filters that override the ProcessObject's GenerateOutputInformation() should generally have the following line if they want to propagate meta- data for both Image and VectorImage
Returns/Sets the number of components in the image. Note that in the ImageBase implementation, this always returns 1. Image returns the
returns the vector length set by the user.
Reimplemented from itk::ImageBase< 2 >.
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Get a reference to a pixel (e.g. for editing).
For efficiency, this function does not check that the image has actually been allocated yet.
Definition at line 230 of file itkImage.h.
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Get a pixel (read only version).
For efficiency, this function does not check that the image has actually been allocated yet.
Definition at line 219 of file itkImage.h.
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Return the Pixel Accessor object
Definition at line 295 of file itkImage.h.
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Return the Pixel Accesor object
Definition at line 302 of file itkImage.h.
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Return a pointer to the container.
Definition at line 264 of file itkImage.h.
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inline |
Definition at line 270 of file itkImage.h.
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overrideprotectedvirtual |
Graft the data and information from one image to another. This is a convenience method to setup a second image with all the meta information of another image and use the same pixel container. Note that this method is different than just using two SmartPointers to the same image since separate DataObjects are still maintained. This method is similar to ImageSource::GraftOutput(). The implementation in ImageBase simply calls CopyInformation() and copies the region ivars. Subclasses of ImageBase are responsible for copying the pixel container.
Reimplemented from itk::ImageBase< 2 >.
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Graft the data and information from one image to another. This is a convenience method to setup a second image with all the meta information of another image and use the same pixel container. Note that this method is different than just using two SmartPointers to the same image since separate DataObjects are still maintained. This method is similar to ImageSource::GraftOutput(). The implementation in ImageBase simply calls CopyInformation() and copies the region ivars. The implementation here refers to the superclass' implementation and then copies over the pixel container.
Reimplemented from itk::ImageBase< 2 >.
Reimplemented in itk::GPUImage< TPixel, VImageDimension >, and itk::GPUImage< TPixel, VImageDimension >.
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overridevirtual |
Restore the data object to its initial state. This means releasing memory.
Reimplemented from itk::DataObject.
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static |
Method for creation through the object factory.
Referenced by itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::AllocateListImage(), and itk::testhelper::ImageRegistrationMethodImageSource< TFixedPixelType, TMovingPixelType, VDimension >::ImageRegistrationMethodImageSource().
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inline |
Access a pixel. This version can be an lvalue.
For efficiency, this function does not check that the image has actually been allocated yet.
Definition at line 240 of file itkImage.h.
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inline |
Access a pixel. This version can only be an rvalue.
For efficiency, this function does not check that the image has actually been allocated yet.
Definition at line 246 of file itkImage.h.
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overrideprotectedvirtual |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::DataObject.
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inline |
Set a pixel value.
Allocate() needs to have been called first – for efficiency, this function does not check that the image has actually been allocated yet.
Definition at line 208 of file itkImage.h.
void itk::Image< TPixel, VImageDimension >::SetPixelContainer | ( | PixelContainer * | container | ) |
Set the container to use. Note that this does not cause the DataObject to be modified.
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friend |
Returns (image1 != image2).
Definition at line 371 of file itkImage.h.
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friend |
Returns (image1 == image2).
operator==
and operator!=
are defined as function templates (rather than as non-templates), just to allow template instantiation of itk::Image
for non-EqualityComparable pixel types. Definition at line 331 of file itkImage.h.
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private |
Memory for the current buffer.
Definition at line 397 of file itkImage.h.