#include <itkLabelStatisticsKeepNObjectsImageFilter.h>
keep N objects according to their statistics attributes
LabelStatisticsKeepNObjectsImageFilter keep the N objects in a labeled image with the highest (or lowest) attribute value. The attributes are the ones of the StatisticsLabelObject.
This implementation was taken from the Insight Journal paper: https://doi.org/10.54294/q6auw4
Definition at line 46 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
Inheritance diagram for itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >:
Collaboration diagram for itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >:Static Public Member Functions | |
| static Pointer | New () |
Static Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TInputImage > | |
| static double | GetGlobalDefaultCoordinateTolerance () |
| static double | GetGlobalDefaultCoordinateTolerance () |
| static double | GetGlobalDefaultDirectionTolerance () |
| static double | GetGlobalDefaultDirectionTolerance () |
| static void | SetGlobalDefaultCoordinateTolerance (double) |
| static void | SetGlobalDefaultCoordinateTolerance (double) |
| static void | SetGlobalDefaultDirectionTolerance (double) |
| static void | SetGlobalDefaultDirectionTolerance (double) |
Static Public Member Functions inherited from itk::Object | |
| static bool | GetGlobalWarningDisplay () |
| static void | GlobalWarningDisplayOff () |
| static void | GlobalWarningDisplayOn () |
| static Pointer | New () |
| static void | SetGlobalWarningDisplay (bool val) |
Static Public Member Functions inherited from itk::LightObject | |
| static void | BreakOnError () |
| static Pointer | New () |
Static Public Attributes | |
| static constexpr unsigned int | ImageDimension = TInputImage::ImageDimension |
| static constexpr unsigned int | InputImageDimension = TInputImage::ImageDimension |
| static constexpr unsigned int | OutputImageDimension = TInputImage::ImageDimension |
Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TInputImage > | |
| static constexpr unsigned int | InputImageDimension |
| static constexpr unsigned int | InputImageDimension |
| static constexpr unsigned int | OutputImageDimension |
| static constexpr unsigned int | OutputImageDimension |
Static Public Attributes inherited from itk::ImageSource< TInputImage > | |
| static constexpr unsigned int | OutputImageDimension |
Private Attributes | |
| AttributeType | m_Attribute {} |
| OutputImagePixelType | m_BackgroundValue {} |
| SizeValueType | m_NumberOfObjects {} |
| bool | m_ReverseOrdering {} |
Additional Inherited Members | |
Protected Types inherited from itk::ImageToImageFilter< TInputImage, TInputImage > | |
| using | InputToOutputRegionCopierType |
| using | OutputToInputRegionCopierType |
Static Protected Member Functions inherited from itk::ImageSource< TInputImage > | |
| static const ImageRegionSplitterBase * | GetGlobalDefaultSplitter () |
| static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION | ThreaderCallback (void *arg) |
Static Protected Member Functions inherited from itk::ProcessObject | |
| template<typename TSourceObject> | |
| static void | MakeRequiredOutputs (TSourceObject &sourceObject, const DataObjectPointerArraySizeType numberOfRequiredOutputs) |
| static constexpr float | progressFixedToFloat (uint32_t fixed) |
| static uint32_t | progressFloatToFixed (float f) |
Protected Attributes inherited from itk::ImageSource< TInputImage > | |
| bool | m_DynamicMultiThreading |
Protected Attributes inherited from itk::ProcessObject | |
| TimeStamp | m_OutputInformationMTime {} |
| bool | m_Updating {} |
Protected Attributes inherited from itk::LightObject | |
| std::atomic< int > | m_ReferenceCount {} |
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::AttributeType = typename LabelObjectType::AttributeType |
Definition at line 83 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::BinarizerType = LabelMapToLabelImageFilter<LabelMapType, OutputImageType> |
Definition at line 85 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::ConstPointer = SmartPointer<const Self> |
Definition at line 55 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::FeatureImageConstPointer = typename FeatureImageType::ConstPointer |
Definition at line 71 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::FeatureImagePixelType = typename FeatureImageType::PixelType |
Definition at line 72 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::FeatureImagePointer = typename FeatureImageType::Pointer |
Definition at line 70 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::FeatureImageType = TFeatureImage |
Definition at line 69 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::InputImageConstPointer = typename InputImageType::ConstPointer |
Definition at line 61 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::InputImagePixelType = typename InputImageType::PixelType |
Definition at line 63 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::InputImagePointer = typename InputImageType::Pointer |
Definition at line 60 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::InputImageRegionType = typename InputImageType::RegionType |
Definition at line 62 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::InputImageType = TInputImage |
Some convenient type alias.
Definition at line 58 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::KeepNObjectsType = StatisticsKeepNObjectsLabelMapFilter<LabelMapType> |
Definition at line 84 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::LabelizerType = LabelImageToLabelMapFilter<InputImageType, LabelMapType> |
Definition at line 81 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::LabelMapType = LabelMap<LabelObjectType> |
Definition at line 80 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::LabelObjectType = StatisticsLabelObject<InputImagePixelType, Self::ImageDimension> |
Definition at line 79 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::LabelObjectValuatorType = StatisticsLabelMapFilter<LabelMapType, TFeatureImage> |
Definition at line 82 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::OutputImageConstPointer = typename OutputImageType::ConstPointer |
Definition at line 65 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::OutputImagePixelType = typename OutputImageType::PixelType |
Definition at line 67 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::OutputImagePointer = typename OutputImageType::Pointer |
Definition at line 64 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::OutputImageRegionType = typename OutputImageType::RegionType |
Definition at line 66 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::OutputImageType = TInputImage |
Definition at line 59 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::Pointer = SmartPointer<Self> |
Definition at line 54 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::Self = LabelStatisticsKeepNObjectsImageFilter |
Standard class type aliases.
Definition at line 52 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
| using itk::LabelStatisticsKeepNObjectsImageFilter< TInputImage, TFeatureImage >::Superclass = ImageToImageFilter<TInputImage, TInputImage> |
Definition at line 53 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
|
protected |
Referenced by GetNameOfClass().
|
overrideprotecteddefault |
|
virtual |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
|
overrideprotectedvirtual |
LabelStatisticsKeepNObjectsImageFilter will produce the entire output.
Reimplemented from itk::ProcessObject.
|
overrideprotectedvirtual |
Single-threaded version of GenerateData. This filter delegates to GrayscaleGeodesicErodeImageFilter.
Reimplemented from itk::ImageSource< TInputImage >.
|
overrideprotectedvirtual |
LabelStatisticsKeepNObjectsImageFilter needs the entire input be available. Thus, it needs to provide an implementation of GenerateInputRequestedRegion().
Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.
|
virtual |
Set/Get the attribute to use to select the object to keep. The default is "Mean".
|
virtual |
Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin().
|
inline |
Get the feature image
Definition at line 145 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
References itk::ProcessObject::GetInput().
|
virtual |
Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.
References LabelStatisticsKeepNObjectsImageFilter().
|
virtual |
Set/Get the number of objects to keep
|
virtual |
Set/Get the ordering of the objects. By default, the ones with the highest value are kept. Turming ReverseOrdering to true make this filter keep the objects with the smallest values
|
static |
Standard New method.
|
overrideprotectedvirtual |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.
|
virtual |
Set/Get the ordering of the objects. By default, the ones with the highest value are kept. Turming ReverseOrdering to true make this filter keep the objects with the smallest values
|
virtual |
Set/Get the ordering of the objects. By default, the ones with the highest value are kept. Turming ReverseOrdering to true make this filter keep the objects with the smallest values
|
virtual |
Set/Get the attribute to use to select the object to keep. The default is "Mean".
Referenced by SetAttribute().
|
inline |
Set/Get the attribute to use to select the object to keep. The default is "Mean".
Definition at line 130 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
References itk::StatisticsLabelObject< InputImagePixelType, Self::ImageDimension >::GetAttributeFromName(), and SetAttribute().
|
virtual |
Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin().
|
inline |
Set the feature image
Definition at line 137 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
References itk::ProcessObject::SetNthInput().
Referenced by SetInput2().
|
inline |
Set the input image
Definition at line 152 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
References itk::ImageToImageFilter< TInputImage, TInputImage >::SetInput().
|
inline |
Set the feature image
Definition at line 159 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
References SetFeatureImage().
|
virtual |
Set/Get the number of objects to keep
|
virtual |
Set/Get the ordering of the objects. By default, the ones with the highest value are kept. Turming ReverseOrdering to true make this filter keep the objects with the smallest values
|
staticconstexpr |
Definition at line 77 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
|
staticconstexpr |
ImageDimension constants
Definition at line 75 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
|
private |
Definition at line 189 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
|
private |
Definition at line 186 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
|
private |
Definition at line 187 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
|
private |
Definition at line 188 of file itkLabelStatisticsKeepNObjectsImageFilter.h.
|
staticconstexpr |
Definition at line 76 of file itkLabelStatisticsKeepNObjectsImageFilter.h.