ITK
6.0.0
Insight Toolkit
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#include <itkStatisticsLabelMapFilter.h>
The valuator class for the StatisticsLabelObject.
StatisticsLabelMapFilter can be used to set the attributes values of the StatisticsLabelObject in a LabelMap.
This implementation was taken from the Insight Journal paper: https://doi.org/10.54294/q6auw4
Definition at line 41 of file itkStatisticsLabelMapFilter.h.
Public Types | |
using | ConstPointer = SmartPointer< const Self > |
using | FeatureImageConstPointer = typename FeatureImageType::ConstPointer |
using | FeatureImagePixelType = typename FeatureImageType::PixelType |
using | FeatureImagePointer = typename FeatureImageType::Pointer |
using | FeatureImageType = TFeatureImage |
using | ImageConstPointer = typename ImageType::ConstPointer |
using | ImagePointer = typename ImageType::Pointer |
using | ImageType = TImage |
using | IndexType = typename ImageType::IndexType |
using | LabelObjectType = typename ImageType::LabelObjectType |
using | MatrixType = typename LabelObjectType::MatrixType |
using | PixelType = typename ImageType::PixelType |
using | Pointer = SmartPointer< Self > |
using | PointType = typename ImageType::PointType |
using | Self = StatisticsLabelMapFilter |
using | Superclass = ShapeLabelMapFilter< TImage > |
using | VectorType = typename LabelObjectType::VectorType |
Public Types inherited from itk::ShapeLabelMapFilter< TImage, Image< TImage::PixelType, TImage::ImageDimension > > | |
using | ConstPointer = SmartPointer< const Self > |
using | ImageConstPointer = typename ImageType::ConstPointer |
using | ImagePointer = typename ImageType::Pointer |
using | ImageType = TImage |
using | IndexType = typename ImageType::IndexType |
using | LabelImageConstPointer = typename LabelImageType::ConstPointer |
using | LabelImagePointer = typename LabelImageType::Pointer |
using | LabelImageType = Image< TImage::PixelType, TImage::ImageDimension > |
using | LabelObjectType = typename ImageType::LabelObjectType |
using | LabelPixelType = typename LabelImageType::PixelType |
using | MatrixType = typename LabelObjectType::MatrixType |
using | OffsetType = typename ImageType::OffsetType |
using | PixelType = typename ImageType::PixelType |
using | Pointer = SmartPointer< Self > |
using | RegionType = typename ImageType::RegionType |
using | Self = ShapeLabelMapFilter |
using | SizeType = typename ImageType::SizeType |
using | Superclass = InPlaceLabelMapFilter< TImage > |
using | VectorType = typename LabelObjectType::VectorType |
Public Types inherited from itk::InPlaceLabelMapFilter< TImage > | |
using | ConstPointer = SmartPointer< const Self > |
using | IndexType = typename InputImageType::IndexType |
using | InputImageConstPointer = typename InputImageType::ConstPointer |
using | InputImagePixelType = typename InputImageType::PixelType |
using | InputImagePointer = typename InputImageType::Pointer |
using | InputImageRegionType = typename InputImageType::RegionType |
using | InputImageType = TImage |
using | LabelObjectType = typename InputImageType::LabelObjectType |
using | PixelType = typename InputImageType::PixelType |
using | Pointer = SmartPointer< Self > |
using | RegionType = typename InputImageType::RegionType |
using | Self = InPlaceLabelMapFilter |
using | Superclass = LabelMapFilter< TImage, TImage > |
using | TOutputImage = TImage |
Public Types inherited from itk::LabelMapFilter< TImage, TImage > | |
using | ConstPointer = SmartPointer< const Self > |
using | LabelObjectType = typename InputImageType::LabelObjectType |
using | OutputImageConstPointer = typename OutputImageType::ConstPointer |
using | OutputImagePixelType = typename OutputImageType::PixelType |
using | OutputImagePointer = typename OutputImageType::Pointer |
using | OutputImageRegionType = typename OutputImageType::RegionType |
using | OutputImageType = TImage |
using | Pointer = SmartPointer< Self > |
using | Self = LabelMapFilter |
using | Superclass = ImageToImageFilter< TImage, TImage > |
Public Types inherited from itk::ImageToImageFilter< TImage, TImage > | |
using | ConstPointer = SmartPointer< const Self > |
using | InputImageConstPointer = typename InputImageType::ConstPointer |
using | InputImagePixelType = typename InputImageType::PixelType |
using | InputImagePointer = typename InputImageType::Pointer |
using | InputImageRegionType = typename InputImageType::RegionType |
using | InputImageType = TImage |
using | Pointer = SmartPointer< Self > |
using | Self = ImageToImageFilter |
using | Superclass = ImageSource< TImage > |
Public Types inherited from itk::ImageSource< TImage > | |
using | ConstPointer = SmartPointer< const Self > |
using | DataObjectIdentifierType = Superclass::DataObjectIdentifierType |
using | DataObjectPointer = DataObject::Pointer |
using | DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType |
using | OutputImagePixelType = typename OutputImageType::PixelType |
using | OutputImagePointer = typename OutputImageType::Pointer |
using | OutputImageRegionType = typename OutputImageType::RegionType |
using | OutputImageType = TImage |
using | Pointer = SmartPointer< Self > |
using | Self = ImageSource |
using | Superclass = ProcessObject |
Public Types inherited from itk::ProcessObject | |
using | ConstPointer = SmartPointer< const Self > |
using | DataObjectIdentifierType = DataObject::DataObjectIdentifierType |
using | DataObjectPointer = DataObject::Pointer |
using | DataObjectPointerArray = std::vector< DataObjectPointer > |
using | DataObjectPointerArraySizeType = DataObjectPointerArray::size_type |
using | MultiThreaderType = MultiThreaderBase |
using | NameArray = std::vector< DataObjectIdentifierType > |
using | Pointer = SmartPointer< Self > |
using | Self = ProcessObject |
using | Superclass = Object |
Public Types inherited from itk::Object | |
using | ConstPointer = SmartPointer< const Self > |
using | Pointer = SmartPointer< Self > |
using | Self = Object |
using | Superclass = LightObject |
Public Types inherited from itk::LightObject | |
using | ConstPointer = SmartPointer< const Self > |
using | Pointer = SmartPointer< Self > |
using | Self = LightObject |
Public Member Functions | |
FeatureImageType * | GetFeatureImage () |
const char * | GetNameOfClass () const override |
void | SetFeatureImage (const TFeatureImage *input) |
void | SetInput1 (TImage *input) |
void | SetInput2 (const TFeatureImage *input) |
virtual void | SetComputeHistogram (bool _arg) |
virtual const bool & | GetComputeHistogram () const |
virtual void | ComputeHistogramOn () |
virtual void | SetNumberOfBins (unsigned int _arg) |
virtual const unsigned int & | GetNumberOfBins () const |
Public Member Functions inherited from itk::ShapeLabelMapFilter< TImage, Image< TImage::PixelType, TImage::ImageDimension > > | |
const char * | GetNameOfClass () const override |
void | SetLabelImage (const Image< TImage::PixelType, TImage::ImageDimension > *input) |
virtual void | SetComputeFeretDiameter (bool _arg) |
virtual const bool & | GetComputeFeretDiameter () const |
virtual void | ComputeFeretDiameterOn () |
virtual void | SetComputePerimeter (bool _arg) |
virtual const bool & | GetComputePerimeter () const |
virtual void | ComputePerimeterOn () |
virtual void | SetComputeOrientedBoundingBox (bool _arg) |
virtual const bool & | GetComputeOrientedBoundingBox () const |
virtual void | ComputeOrientedBoundingBoxOn () |
Public Member Functions inherited from itk::InPlaceLabelMapFilter< TImage > | |
bool | CanRunInPlace () const |
const char * | GetNameOfClass () const override |
virtual void | SetInPlace (bool _arg) |
virtual bool | GetInPlace () |
virtual void | InPlaceOn () |
Public Member Functions inherited from itk::LabelMapFilter< TImage, TImage > | |
void | EnlargeOutputRequestedRegion (DataObject *) override |
void | GenerateInputRequestedRegion () override |
const char * | GetNameOfClass () const override |
Public Member Functions inherited from itk::ImageToImageFilter< TImage, TImage > | |
const InputImageType * | GetInput () const |
const InputImageType * | GetInput (unsigned int idx) const |
const char * | GetNameOfClass () const override |
void | PopBackInput () override |
void | PopFrontInput () override |
virtual void | PushBackInput (const InputImageType *input) |
virtual void | PushFrontInput (const InputImageType *input) |
virtual void | SetInput (const DataObjectIdentifierType &key, DataObject *input) |
virtual void | SetInput (const InputImageType *input) |
virtual void | SetInput (unsigned int, const TImage *image) |
virtual void | SetCoordinateTolerance (double _arg) |
virtual double | GetCoordinateTolerance () const |
virtual void | SetDirectionTolerance (double _arg) |
virtual double | GetDirectionTolerance () const |
Public Member Functions inherited from itk::ImageSource< TImage > | |
const char * | GetNameOfClass () const override |
OutputImageType * | GetOutput (unsigned int idx) |
OutputImageType * | GetOutput () |
const OutputImageType * | GetOutput () const |
virtual void | GraftOutput (DataObject *graft) |
virtual void | GraftOutput (const DataObjectIdentifierType &key, DataObject *graft) |
virtual void | GraftNthOutput (unsigned int idx, DataObject *graft) |
ProcessObject::DataObjectPointer | MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override |
ProcessObject::DataObjectPointer | MakeOutput (const ProcessObject::DataObjectIdentifierType &) override |
Public Member Functions inherited from itk::ProcessObject | |
virtual void | AbortGenerateDataOn () |
virtual void | EnlargeOutputRequestedRegion (DataObject *) |
virtual const bool & | GetAbortGenerateData () const |
DataObjectPointerArray | GetIndexedInputs () |
DataObjectPointerArray | GetIndexedOutputs () |
NameArray | GetInputNames () const |
DataObjectPointerArray | GetInputs () |
MultiThreaderType * | GetMultiThreader () const |
const char * | GetNameOfClass () const override |
DataObjectPointerArraySizeType | GetNumberOfIndexedInputs () const |
DataObjectPointerArraySizeType | GetNumberOfIndexedOutputs () const |
DataObjectPointerArraySizeType | GetNumberOfInputs () const |
DataObjectPointerArraySizeType | GetNumberOfOutputs () const |
virtual DataObjectPointerArraySizeType | GetNumberOfValidRequiredInputs () const |
NameArray | GetOutputNames () const |
DataObjectPointerArray | GetOutputs () |
virtual float | GetProgress () const |
NameArray | GetRequiredInputNames () const |
bool | HasInput (const DataObjectIdentifierType &key) const |
bool | HasOutput (const DataObjectIdentifierType &key) const |
void | IncrementProgress (float increment) |
virtual DataObjectPointer | MakeOutput (const DataObjectIdentifierType &) |
virtual DataObjectPointer | MakeOutput (DataObjectPointerArraySizeType idx) |
virtual void | PrepareOutputs () |
virtual void | PropagateRequestedRegion (DataObject *output) |
virtual void | ResetPipeline () |
virtual void | SetAbortGenerateData (bool _arg) |
void | SetMultiThreader (MultiThreaderType *threader) |
virtual void | Update () |
virtual void | UpdateLargestPossibleRegion () |
virtual void | UpdateOutputData (DataObject *output) |
virtual void | UpdateOutputInformation () |
void | UpdateProgress (float progress) |
virtual void | SetReleaseDataFlag (bool val) |
virtual bool | GetReleaseDataFlag () const |
void | ReleaseDataFlagOn () |
void | ReleaseDataFlagOff () |
virtual void | SetReleaseDataBeforeUpdateFlag (bool _arg) |
virtual const bool & | GetReleaseDataBeforeUpdateFlag () const |
virtual void | ReleaseDataBeforeUpdateFlagOn () |
virtual void | SetNumberOfWorkUnits (ThreadIdType _arg) |
virtual const ThreadIdType & | GetNumberOfWorkUnits () const |
Public Member Functions inherited from itk::Object | |
unsigned long | AddObserver (const EventObject &event, Command *cmd) const |
unsigned long | AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const |
LightObject::Pointer | CreateAnother () const override |
virtual void | DebugOff () const |
virtual void | DebugOn () const |
Command * | GetCommand (unsigned long tag) |
bool | GetDebug () const |
MetaDataDictionary & | GetMetaDataDictionary () |
const MetaDataDictionary & | GetMetaDataDictionary () const |
virtual ModifiedTimeType | GetMTime () const |
const char * | GetNameOfClass () const override |
virtual const TimeStamp & | GetTimeStamp () const |
bool | HasObserver (const EventObject &event) const |
void | InvokeEvent (const EventObject &) |
void | InvokeEvent (const EventObject &) const |
virtual void | Modified () const |
void | Register () const override |
void | RemoveAllObservers () |
void | RemoveObserver (unsigned long tag) const |
void | SetDebug (bool debugFlag) const |
void | SetReferenceCount (int) override |
void | UnRegister () const noexcept override |
void | SetMetaDataDictionary (const MetaDataDictionary &rhs) |
void | SetMetaDataDictionary (MetaDataDictionary &&rrhs) |
virtual void | SetObjectName (std::string _arg) |
virtual const std::string & | GetObjectName () const |
Public Member Functions inherited from itk::LightObject | |
Pointer | Clone () const |
virtual Pointer | CreateAnother () const |
virtual void | Delete () |
virtual const char * | GetNameOfClass () const |
virtual int | GetReferenceCount () const |
void | Print (std::ostream &os, Indent indent=0) const |
virtual void | Register () const |
virtual void | SetReferenceCount (int) |
virtual void | UnRegister () const noexcept |
Static Public Member Functions | |
static constexpr unsigned int | GetDefaultNumberOfBins () |
static Pointer | New () |
Static Public Member Functions inherited from itk::ShapeLabelMapFilter< TImage, Image< TImage::PixelType, TImage::ImageDimension > > | |
static Pointer | New () |
Static Public Member Functions inherited from itk::InPlaceLabelMapFilter< TImage > | |
static Pointer | New () |
Static Public Member Functions inherited from itk::LabelMapFilter< TImage, TImage > | |
static Pointer | New () |
Static Public Member Functions inherited from itk::ImageToImageFilter< TImage, TImage > | |
static double | GetGlobalDefaultCoordinateTolerance () |
static double | GetGlobalDefaultDirectionTolerance () |
static void | SetGlobalDefaultCoordinateTolerance (double) |
static void | SetGlobalDefaultDirectionTolerance (double) |
Static Public Member Functions inherited from itk::Object | |
static bool | GetGlobalWarningDisplay () |
static void | GlobalWarningDisplayOff () |
static void | GlobalWarningDisplayOn () |
static Pointer | New () |
static void | SetGlobalWarningDisplay (bool val) |
Static Public Member Functions inherited from itk::LightObject | |
static void | BreakOnError () |
static Pointer | New () |
Static Public Attributes | |
static constexpr unsigned int | ImageDimension = TImage::ImageDimension |
Static Public Attributes inherited from itk::ShapeLabelMapFilter< TImage, Image< TImage::PixelType, TImage::ImageDimension > > | |
static constexpr unsigned int | ImageDimension |
Static Public Attributes inherited from itk::InPlaceLabelMapFilter< TImage > | |
static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | OutputImageDimension |
Static Public Attributes inherited from itk::LabelMapFilter< TImage, TImage > | |
static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | OutputImageDimension |
Static Public Attributes inherited from itk::ImageToImageFilter< TImage, TImage > | |
static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | OutputImageDimension |
Static Public Attributes inherited from itk::ImageSource< TImage > | |
static constexpr unsigned int | OutputImageDimension |
Private Attributes | |
bool | m_ComputeHistogram { true } |
FeatureImagePixelType | m_Maximum {} |
FeatureImagePixelType | m_Minimum {} |
unsigned int | m_NumberOfBins { GetDefaultNumberOfBins() } |
Additional Inherited Members | |
Protected Types inherited from itk::ImageToImageFilter< TImage, TImage > | |
using | InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension > |
using | OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension > |
Static Protected Member Functions inherited from itk::ImageSource< TImage > | |
static const ImageRegionSplitterBase * | GetGlobalDefaultSplitter () |
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION | ThreaderCallback (void *arg) |
Static Protected Member Functions inherited from itk::ProcessObject | |
template<typename TSourceObject > | |
static void | MakeRequiredOutputs (TSourceObject &sourceObject, const DataObjectPointerArraySizeType numberOfRequiredOutputs) |
static constexpr float | progressFixedToFloat (uint32_t fixed) |
static uint32_t | progressFloatToFixed (float f) |
Protected Attributes inherited from itk::LabelMapFilter< TImage, TImage > | |
std::mutex | m_LabelObjectContainerLock |
Protected Attributes inherited from itk::ImageSource< TImage > | |
bool | m_DynamicMultiThreading |
Protected Attributes inherited from itk::ProcessObject | |
TimeStamp | m_OutputInformationMTime {} |
bool | m_Updating {} |
Protected Attributes inherited from itk::LightObject | |
std::atomic< int > | m_ReferenceCount {} |
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::ConstPointer = SmartPointer<const Self> |
Definition at line 51 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::FeatureImageConstPointer = typename FeatureImageType::ConstPointer |
Definition at line 66 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::FeatureImagePixelType = typename FeatureImageType::PixelType |
Definition at line 67 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::FeatureImagePointer = typename FeatureImageType::Pointer |
Definition at line 65 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::FeatureImageType = TFeatureImage |
Definition at line 64 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::ImageConstPointer = typename ImageType::ConstPointer |
Definition at line 56 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::ImagePointer = typename ImageType::Pointer |
Definition at line 55 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::ImageType = TImage |
Some convenient type alias.
Definition at line 54 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::IndexType = typename ImageType::IndexType |
Definition at line 58 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::LabelObjectType = typename ImageType::LabelObjectType |
Definition at line 60 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::MatrixType = typename LabelObjectType::MatrixType |
Definition at line 61 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::PixelType = typename ImageType::PixelType |
Definition at line 57 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::Pointer = SmartPointer<Self> |
Definition at line 50 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::PointType = typename ImageType::PointType |
Definition at line 59 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::Self = StatisticsLabelMapFilter |
Standard class type aliases.
Definition at line 48 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::Superclass = ShapeLabelMapFilter<TImage> |
Definition at line 49 of file itkStatisticsLabelMapFilter.h.
using itk::StatisticsLabelMapFilter< TImage, TFeatureImage >::VectorType = typename LabelObjectType::VectorType |
Definition at line 62 of file itkStatisticsLabelMapFilter.h.
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overrideprotecteddefault |
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overrideprotectedvirtual |
If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). The execution flow in the default GenerateData() method will be: 1) Allocate the output buffer 2) Call BeforeThreadedGenerateData() 3) Spawn threads, calling ThreadedGenerateData() in each thread. 4) Call AfterThreadedGenerateData() Note that this flow of control is only available if a filter provides a ThreadedGenerateData() method and NOT a GenerateData() method.
Reimplemented from itk::ImageSource< TImage >.
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Set/Get whether the histogram should be attached to the label object or not. This option defaults to true
, but because the histogram may take a lot of memory compared to the other attributes, this option is useful to reduce the memory usage when the histogram is not required.
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Set/Get whether the histogram should be attached to the label object or not. This option defaults to true
, but because the histogram may take a lot of memory compared to the other attributes, this option is useful to reduce the memory usage when the histogram is not required.
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inlinestaticconstexpr |
Definition at line 140 of file itkStatisticsLabelMapFilter.h.
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Get the feature image
Definition at line 99 of file itkStatisticsLabelMapFilter.h.
References itk::ProcessObject::GetInput().
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Reimplemented from itk::ProcessObject.
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Set/Get the number of bins in the histogram. Note that the histogram is used to compute the median value, and that this option may have an effect on the value of the median.
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Standard New method.
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Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::ProcessObject.
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Set/Get whether the histogram should be attached to the label object or not. This option defaults to true
, but because the histogram may take a lot of memory compared to the other attributes, this option is useful to reduce the memory usage when the histogram is not required.
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inline |
Set the feature image
Definition at line 91 of file itkStatisticsLabelMapFilter.h.
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Set the input image
Definition at line 106 of file itkStatisticsLabelMapFilter.h.
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Set the feature image
Definition at line 113 of file itkStatisticsLabelMapFilter.h.
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Set/Get the number of bins in the histogram. Note that the histogram is used to compute the median value, and that this option may have an effect on the value of the median.
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staticconstexpr |
ImageDimension constants
Definition at line 70 of file itkStatisticsLabelMapFilter.h.
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Definition at line 164 of file itkStatisticsLabelMapFilter.h.
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private |
Definition at line 162 of file itkStatisticsLabelMapFilter.h.
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Definition at line 161 of file itkStatisticsLabelMapFilter.h.
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Definition at line 163 of file itkStatisticsLabelMapFilter.h.