ITK  6.0.0
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Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Private Types | Private Attributes | List of all members

#include <itkScalarImageKmeansImageFilter.h>

Detailed Description

template<typename TInputImage, typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
class itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >

Classifies the intensity values of a scalar image using the K-Means algorithm.

Given an input image with scalar values, it uses the K-Means statistical classifier in order to define labels for every pixel in the image. The filter is templated over the type of the input image. The output image is predefined as having the same dimension of the input image and pixel type unsigned char, under the assumption that the classifier will generate less than 256 classes.

You may want to look also at the RelabelImageFilter that may be used as a postprocessing stage, in particular if you are interested in ordering the labels by their relative size in number of pixels.

See also
Image
ImageKmeansModelEstimator
KdTreeBasedKmeansEstimator, WeightedCentroidKdTreeGenerator, KdTree
RelabelImageFilter
ITK Sphinx Examples:
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Definition at line 65 of file itkScalarImageKmeansImageFilter.h.

+ Inheritance diagram for itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >:
+ Collaboration diagram for itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >:

Public Types

using AdaptorType = itk::Statistics::ImageToListSampleAdaptor< InputImageType >
 
using ClassifierType = itk::Statistics::SampleClassifierFilter< AdaptorType >
 
using ClassLabelVectorType = typename ClassifierType::ClassLabelVectorType
 
using ConstPointer = SmartPointer< const Self >
 
using DecisionRuleType = itk::Statistics::MinimumDecisionRule
 
using EstimatorType = itk::Statistics::KdTreeBasedKmeansEstimator< TreeType >
 
using ImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImage
 
using InputPixelType = typename InputImageType::PixelType
 
using MeasurementVectorType = typename AdaptorType::MeasurementVectorType
 
using MembershipFunctionOriginType = typename MembershipFunctionType::CentroidType
 
using MembershipFunctionPointer = typename MembershipFunctionType::Pointer
 
using MembershipFunctionType = itk::Statistics::DistanceToCentroidMembershipFunction< MeasurementVectorType >
 
using MembershipFunctionVectorType = typename ClassifierType::MembershipFunctionVectorType
 
using OutputImageType = TOutputImage
 
using OutputPixelType = typename OutputImageType::PixelType
 
using ParametersType = typename EstimatorType::ParametersType
 
using Pointer = SmartPointer< Self >
 
using RealPixelType = typename NumericTraits< InputPixelType >::RealType
 
using RegionOfInterestFilterType = RegionOfInterestImageFilter< InputImageType, InputImageType >
 
using Self = ScalarImageKmeansImageFilter
 
using Superclass = ImageToImageFilter< InputImageType, OutputImageType >
 
using TreeGeneratorType = itk::Statistics::WeightedCentroidKdTreeGenerator< AdaptorType >
 
using TreeType = typename TreeGeneratorType::KdTreeType
 
- Public Types inherited from itk::ImageToImageFilter< TInputImage, Image< unsigned char, TInputImage::ImageDimension > >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImage
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< Image< unsigned char, TInputImage::ImageDimension > >
 
- Public Types inherited from itk::ImageSource< Image< unsigned char, TInputImage::ImageDimension > >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = Image< unsigned char, TInputImage::ImageDimension >
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

void AddClassWithInitialMean (RealPixelType mean)
 
virtual const ParametersTypeGetFinalMeans () const
 
virtual const ImageRegionTypeGetImageRegion () const
 
const char * GetNameOfClass () const override
 
void SetImageRegion (const ImageRegionType &region)
 
virtual void SetUseNonContiguousLabels (bool _arg)
 
virtual const bool & GetUseNonContiguousLabels () const
 
virtual void UseNonContiguousLabelsOn ()
 
- Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, Image< unsigned char, TInputImage::ImageDimension > >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
const char * GetNameOfClass () const override
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *input)
 
virtual void PushFrontInput (const InputImageType *input)
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetInput (const InputImageType *input)
 
virtual void SetInput (unsigned int, const TInputImage *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< Image< unsigned char, TInputImage::ImageDimension > >
const char * GetNameOfClass () const override
 
OutputImageTypeGetOutput (unsigned int idx)
 
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
virtual void GraftOutput (DataObject *graft)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *graft)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *graft)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
MultiThreaderTypeGetMultiThreader () const
 
const char * GetNameOfClass () const override
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual DataObjectPointerArraySizeType GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual float GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
void IncrementProgress (float increment)
 
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
 
virtual DataObjectPointer MakeOutput (DataObjectPointerArraySizeType idx)
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
virtual void SetReleaseDataFlag (bool val)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *cmd) const
 
unsigned long AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const
 
LightObject::Pointer CreateAnother () const override
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
const char * GetNameOfClass () const override
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag) const
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexcept override
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
Pointer Clone () const
 
virtual Pointer CreateAnother () const
 
virtual void Delete ()
 
virtual const char * GetNameOfClass () const
 
virtual int GetReferenceCount () const
 
void Print (std::ostream &os, Indent indent=0) const
 
virtual void Register () const
 
virtual void SetReferenceCount (int)
 
virtual void UnRegister () const noexcept
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, Image< unsigned char, TInputImage::ImageDimension > >
static double GetGlobalDefaultCoordinateTolerance ()
 
static double GetGlobalDefaultDirectionTolerance ()
 
static void SetGlobalDefaultCoordinateTolerance (double)
 
static void SetGlobalDefaultDirectionTolerance (double)
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool val)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static constexpr unsigned int ImageDimension = TInputImage::ImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, Image< unsigned char, TInputImage::ImageDimension > >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< Image< unsigned char, TInputImage::ImageDimension > >
static constexpr unsigned int OutputImageDimension
 

Protected Member Functions

void GenerateData () override
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
 ScalarImageKmeansImageFilter ()
 
void VerifyPreconditions () const override
 
 ~ScalarImageKmeansImageFilter () override=default
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, Image< unsigned char, TInputImage::ImageDimension > >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
void GenerateInputRequestedRegion () override
 
 ImageToImageFilter ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
void VerifyInputInformation () const override
 
 ~ImageToImageFilter () override=default
 
virtual void PushBackInput (const DataObject *input)
 
virtual void PushFrontInput (const DataObject *input)
 
- Protected Member Functions inherited from itk::ImageSource< Image< unsigned char, TInputImage::ImageDimension > >
virtual void AfterThreadedGenerateData ()
 
virtual void AllocateOutputs ()
 
virtual void BeforeThreadedGenerateData ()
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
void GenerateData () override
 
virtual const ImageRegionSplitterBaseGetImageRegionSplitter () const
 
 ImageSource ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
 ~ImageSource () override=default
 
virtual void ThreadedGenerateData (const OutputImageRegionType &region, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void AddOutput (DataObject *output)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateData ()
 
virtual void GenerateInputRequestedRegion ()
 
virtual void GenerateOutputInformation ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredInputs () const
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
virtual void PopBackInput ()
 
virtual void PopFrontInput ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void PushBackInput (const DataObject *input)
 
virtual void PushFrontInput (const DataObject *input)
 
virtual void ReleaseInputs ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType idx, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType idx, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &name, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *object)
 
virtual void SetPrimaryOutput (DataObject *object)
 
void SetRequiredInputNames (const NameArray &)
 
virtual void VerifyInputInformation () const
 
virtual void VerifyPreconditions () const
 
 ~ProcessObject () override
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType i)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType i) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
virtual bool GetThreaderUpdateProgress () const
 
virtual void ThreaderUpdateProgressOn ()
 
virtual void SetThreaderUpdateProgress (bool arg)
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual void SetTimeStamp (const TimeStamp &timeStamp)
 
 ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintSelf (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Types

using MeansContainer = std::vector< RealPixelType >
 

Private Attributes

ParametersType m_FinalMeans {}
 
ImageRegionType m_ImageRegion {}
 
bool m_ImageRegionDefined { false }
 
MeansContainer m_InitialMeans {}
 
bool m_UseNonContiguousLabels { false }
 

Additional Inherited Members

- Protected Types inherited from itk::ImageToImageFilter< TInputImage, Image< unsigned char, TInputImage::ImageDimension > >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 
- Static Protected Member Functions inherited from itk::ImageSource< Image< unsigned char, TInputImage::ImageDimension > >
static const ImageRegionSplitterBaseGetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION ThreaderCallback (void *arg)
 
- Static Protected Member Functions inherited from itk::ProcessObject
template<typename TSourceObject >
static void MakeRequiredOutputs (TSourceObject &sourceObject, const DataObjectPointerArraySizeType numberOfRequiredOutputs)
 
static constexpr float progressFixedToFloat (uint32_t fixed)
 
static uint32_t progressFloatToFixed (float f)
 
- Protected Attributes inherited from itk::ImageSource< Image< unsigned char, TInputImage::ImageDimension > >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime {}
 
bool m_Updating {}
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount {}
 

Member Typedef Documentation

◆ AdaptorType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::AdaptorType = itk::Statistics::ImageToListSampleAdaptor<InputImageType>

Create a List from the scalar image.

Definition at line 97 of file itkScalarImageKmeansImageFilter.h.

◆ ClassifierType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::ClassifierType = itk::Statistics::SampleClassifierFilter<AdaptorType>

Definition at line 103 of file itkScalarImageKmeansImageFilter.h.

◆ ClassLabelVectorType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::ClassLabelVectorType = typename ClassifierType::ClassLabelVectorType

Definition at line 106 of file itkScalarImageKmeansImageFilter.h.

◆ ConstPointer

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::ConstPointer = SmartPointer<const Self>

Definition at line 81 of file itkScalarImageKmeansImageFilter.h.

◆ DecisionRuleType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::DecisionRuleType = itk::Statistics::MinimumDecisionRule

Definition at line 104 of file itkScalarImageKmeansImageFilter.h.

◆ EstimatorType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::EstimatorType = itk::Statistics::KdTreeBasedKmeansEstimator<TreeType>

Definition at line 116 of file itkScalarImageKmeansImageFilter.h.

◆ ImageRegionType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::ImageRegionType = typename InputImageType::RegionType

Definition at line 120 of file itkScalarImageKmeansImageFilter.h.

◆ InputImageType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::InputImageType = TInputImage

Convenient type alias for simplifying declarations.

Definition at line 74 of file itkScalarImageKmeansImageFilter.h.

◆ InputPixelType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::InputPixelType = typename InputImageType::PixelType

Image type alias support

Definition at line 90 of file itkScalarImageKmeansImageFilter.h.

◆ MeansContainer

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::MeansContainer = std::vector<RealPixelType>
private

Definition at line 174 of file itkScalarImageKmeansImageFilter.h.

◆ MeasurementVectorType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::MeasurementVectorType = typename AdaptorType::MeasurementVectorType

Define the Measurement vector type from the AdaptorType.

Definition at line 100 of file itkScalarImageKmeansImageFilter.h.

◆ MembershipFunctionOriginType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::MembershipFunctionOriginType = typename MembershipFunctionType::CentroidType

Definition at line 109 of file itkScalarImageKmeansImageFilter.h.

◆ MembershipFunctionPointer

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::MembershipFunctionPointer = typename MembershipFunctionType::Pointer

Definition at line 111 of file itkScalarImageKmeansImageFilter.h.

◆ MembershipFunctionType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::MembershipFunctionType = itk::Statistics::DistanceToCentroidMembershipFunction<MeasurementVectorType>

Definition at line 102 of file itkScalarImageKmeansImageFilter.h.

◆ MembershipFunctionVectorType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::MembershipFunctionVectorType = typename ClassifierType::MembershipFunctionVectorType

Definition at line 108 of file itkScalarImageKmeansImageFilter.h.

◆ OutputImageType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::OutputImageType = TOutputImage

Definition at line 75 of file itkScalarImageKmeansImageFilter.h.

◆ OutputPixelType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::OutputPixelType = typename OutputImageType::PixelType

Definition at line 91 of file itkScalarImageKmeansImageFilter.h.

◆ ParametersType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::ParametersType = typename EstimatorType::ParametersType

Definition at line 118 of file itkScalarImageKmeansImageFilter.h.

◆ Pointer

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::Pointer = SmartPointer<Self>

Definition at line 80 of file itkScalarImageKmeansImageFilter.h.

◆ RealPixelType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::RealPixelType = typename NumericTraits<InputPixelType>::RealType

Type used for representing the Mean values.

Definition at line 94 of file itkScalarImageKmeansImageFilter.h.

◆ RegionOfInterestFilterType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::RegionOfInterestFilterType = RegionOfInterestImageFilter<InputImageType, InputImageType>

Definition at line 122 of file itkScalarImageKmeansImageFilter.h.

◆ Self

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::Self = ScalarImageKmeansImageFilter

Standard class type aliases.

Definition at line 78 of file itkScalarImageKmeansImageFilter.h.

◆ Superclass

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::Superclass = ImageToImageFilter<InputImageType, OutputImageType>

Definition at line 79 of file itkScalarImageKmeansImageFilter.h.

◆ TreeGeneratorType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::TreeGeneratorType = itk::Statistics::WeightedCentroidKdTreeGenerator<AdaptorType>

Create the K-d tree structure.

Definition at line 114 of file itkScalarImageKmeansImageFilter.h.

◆ TreeType

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
using itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::TreeType = typename TreeGeneratorType::KdTreeType

Definition at line 115 of file itkScalarImageKmeansImageFilter.h.

Constructor & Destructor Documentation

◆ ScalarImageKmeansImageFilter()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::ScalarImageKmeansImageFilter ( )
protected

◆ ~ScalarImageKmeansImageFilter()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::~ScalarImageKmeansImageFilter ( )
overrideprotecteddefault

Member Function Documentation

◆ AddClassWithInitialMean()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
void itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::AddClassWithInitialMean ( RealPixelType  mean)

Add a new class to the classification by specifying its initial mean.

◆ GenerateData()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
void itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::GenerateData ( )
overrideprotectedvirtual

This method runs the statistical methods that identify the means of the classes and the use the distances to those means in order to label the image pixels.

See also
ImageToImageFilter::GenerateData()

Reimplemented from itk::ProcessObject.

◆ GetFinalMeans()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
virtual const ParametersType & itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::GetFinalMeans ( ) const
virtual

Return the array of Means found after the classification.

◆ GetImageRegion()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
virtual const ImageRegionType & itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::GetImageRegion ( ) const
virtual

Get the region over which the statistics will be computed

◆ GetNameOfClass()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
const char * itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::GetNameOfClass ( ) const
overridevirtual

◆ GetUseNonContiguousLabels()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
virtual const bool & itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::GetUseNonContiguousLabels ( ) const
virtual

Set/Get the UseNonContiguousLabels flag. When this is set to false the labels are numbered contiguously, like in {0,1,3..N}. When the flag is set to true, the labels are selected in order to span the dynamic range of the output image. This last option is useful when the output image is intended only for display. The default value is false.

◆ New()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
static Pointer itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::New ( )
static

Method for creation through the object factory.

◆ PrintSelf()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
void itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ProcessObject.

◆ SetImageRegion()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
void itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::SetImageRegion ( const ImageRegionType region)

Set Region method to constrain classification to a certain region

◆ SetUseNonContiguousLabels()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
virtual void itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::SetUseNonContiguousLabels ( bool  _arg)
virtual

Set/Get the UseNonContiguousLabels flag. When this is set to false the labels are numbered contiguously, like in {0,1,3..N}. When the flag is set to true, the labels are selected in order to span the dynamic range of the output image. This last option is useful when the output image is intended only for display. The default value is false.

◆ UseNonContiguousLabelsOn()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
virtual void itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::UseNonContiguousLabelsOn ( )
virtual

Set/Get the UseNonContiguousLabels flag. When this is set to false the labels are numbered contiguously, like in {0,1,3..N}. When the flag is set to true, the labels are selected in order to span the dynamic range of the output image. This last option is useful when the output image is intended only for display. The default value is false.

◆ VerifyPreconditions()

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
void itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::VerifyPreconditions ( ) const
overrideprotectedvirtual

Verifies that the process object has been configured correctly, that all required inputs are set, and needed parameters are set appropriately. If not valid an exceptions will be thrown.

This method is called before UpdateOutputInformation() is propagated to the inputs.

The ProcessObject's implementation verifies that the m_NumberOfRequiredInputs are set and not null.

Reimplemented from itk::ProcessObject.

Member Data Documentation

◆ ImageDimension

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
constexpr unsigned int itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::ImageDimension = TInputImage::ImageDimension
staticconstexpr

Extract dimension from input and output image.

Definition at line 71 of file itkScalarImageKmeansImageFilter.h.

◆ m_FinalMeans

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
ParametersType itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::m_FinalMeans {}
private

Definition at line 178 of file itkScalarImageKmeansImageFilter.h.

◆ m_ImageRegion

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
ImageRegionType itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::m_ImageRegion {}
private

Definition at line 182 of file itkScalarImageKmeansImageFilter.h.

◆ m_ImageRegionDefined

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
bool itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::m_ImageRegionDefined { false }
private

Definition at line 184 of file itkScalarImageKmeansImageFilter.h.

◆ m_InitialMeans

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
MeansContainer itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::m_InitialMeans {}
private

Definition at line 176 of file itkScalarImageKmeansImageFilter.h.

◆ m_UseNonContiguousLabels

template<typename TInputImage , typename TOutputImage = Image<unsigned char, TInputImage::ImageDimension>>
bool itk::ScalarImageKmeansImageFilter< TInputImage, TOutputImage >::m_UseNonContiguousLabels { false }
private

Definition at line 180 of file itkScalarImageKmeansImageFilter.h.


The documentation for this class was generated from the following file: