itkVelocityFieldTransform.h

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/*=========================================================================
 *
 *  Copyright NumFOCUS
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         https://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef itkVelocityFieldTransform_h
#define itkVelocityFieldTransform_h
 
#include "itkDisplacementFieldTransform.h"
 
namespace itk
{

template <typename TParametersValueType, unsigned int VDimension>
class ITK_TEMPLATE_EXPORT VelocityFieldTransform : public DisplacementFieldTransform<TParametersValueType, VDimension>
{
public:
  ITK_DISALLOW_COPY_AND_MOVE(VelocityFieldTransform);

  using Self = VelocityFieldTransform;
  using Superclass = DisplacementFieldTransform<TParametersValueType, VDimension>;
  using Pointer = SmartPointer<Self>;
  using ConstPointer = SmartPointer<const Self>;

  itkOverrideGetNameOfClassMacro(VelocityFieldTransform);

  itkNewMacro(Self);

  using typename Superclass::InverseTransformBasePointer;

  using typename Superclass::ScalarType;

  using typename Superclass::FixedParametersType;
  using typename Superclass::FixedParametersValueType;
  using typename Superclass::ParametersType;
  using typename Superclass::ParametersValueType;

  using typename Superclass::TransformCategoryEnum;

  using typename Superclass::NumberOfParametersType;

  using typename Superclass::InputPointType;
  using typename Superclass::OutputPointType;

  using typename Superclass::InputVectorType;
  using typename Superclass::OutputVectorType;
 
  using typename Superclass::InputVectorPixelType;
  using typename Superclass::OutputVectorPixelType;

  using typename Superclass::DerivativeType;

  static constexpr unsigned int VelocityFieldDimension = VDimension + 1;

  static constexpr unsigned int Dimension = VDimension;

  using typename Superclass::DisplacementFieldType;
  using DisplacementFieldPointer = typename DisplacementFieldType::Pointer;

  using typename Superclass::VectorImageDisplacementFieldType;

  using VelocityFieldType = Image<OutputVectorType, VelocityFieldDimension>;
  using VelocityFieldPointer = typename VelocityFieldType::Pointer;

  using IndexType = typename VelocityFieldType::IndexType;
  using RegionType = typename VelocityFieldType::RegionType;
  using SizeType = typename VelocityFieldType::SizeType;
  using SpacingType = typename VelocityFieldType::SpacingType;
  using DirectionType = typename VelocityFieldType::DirectionType;
  using PointType = typename VelocityFieldType::PointType;
  using PixelType = typename VelocityFieldType::PixelType;
 
  using VelocityFieldInterpolatorType = VectorInterpolateImageFunction<VelocityFieldType, ScalarType>;
  using VelocityFieldInterpolatorPointer = typename VelocityFieldInterpolatorType::Pointer;

  using OptimizerParametersHelperType =
    ImageVectorOptimizerParametersHelper<ScalarType, Dimension, VelocityFieldDimension>;
 
  using Superclass::SetDisplacementField;

  virtual void
  SetVelocityField(VelocityFieldType *);
  itkGetModifiableObjectMacro(VelocityField, VelocityFieldType);
 
  void
  SetFixedParameters(const FixedParametersType &) override;

  virtual void
  SetVelocityFieldInterpolator(VelocityFieldInterpolatorType *);
  itkGetModifiableObjectMacro(VelocityFieldInterpolator, VelocityFieldInterpolatorType);

  itkGetConstReferenceMacro(VelocityFieldSetTime, unsigned long);

  void
  SetDisplacementField(DisplacementFieldType * displacementField) override
  {
    itkDebugMacro("setting DisplacementField to " << displacementField);
    if (this->m_DisplacementField != displacementField)
    {
      this->m_DisplacementField = displacementField;
      this->Modified();
    }
  }

 
  void
  UpdateTransformParameters(const DerivativeType & update, ScalarType factor = 1.0) override;

  bool
  GetInverse(Self * inverse) const;

  InverseTransformBasePointer
  GetInverseTransform() const override;

  virtual void
  IntegrateVelocityField()
  {}

  itkSetClampMacro(LowerTimeBound, ScalarType, 0.0, 1.0);

  itkGetConstMacro(LowerTimeBound, ScalarType);

  itkSetClampMacro(UpperTimeBound, ScalarType, 0.0, 1.0);

  itkGetConstMacro(UpperTimeBound, ScalarType);

  itkSetMacro(NumberOfIntegrationSteps, unsigned int);

  itkGetConstMacro(NumberOfIntegrationSteps, unsigned int);
 
protected:
  VelocityFieldTransform();
  ~VelocityFieldTransform() override = default;
  void
  PrintSelf(std::ostream & os, Indent indent) const override;

  typename LightObject::Pointer
  InternalClone() const override;
 
  typename DisplacementFieldType::Pointer
  CopyDisplacementField(const DisplacementFieldType *) const;
 
  ScalarType m_LowerTimeBound{};
  ScalarType m_UpperTimeBound{};
 
  unsigned int m_NumberOfIntegrationSteps{};
 
  VelocityFieldPointer m_VelocityField{};

  typename VelocityFieldInterpolatorType::Pointer m_VelocityFieldInterpolator{};

  unsigned long m_VelocityFieldSetTime{};
 
private:
  virtual void
  SetFixedParametersFromVelocityField() const;
};
} // end namespace itk
 
#ifndef ITK_MANUAL_INSTANTIATION
#  include "itkVelocityFieldTransform.hxx"
#endif
 
#endif // itkVelocityFieldTransform_h