#include <itkConstrainedRegionBasedLevelSetFunctionSharedData.h>
Helper class used to share data in the ScalarChanAndVeseLevelSetFunction.
This class holds cache data used during the computation of the LevelSet updates.
Based on the paper [22].
This code was taken from the Insight Journal paper:
"Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes" https://doi.org/10.54294/wvwmf8
That is based on the papers:
"Level Set Segmentation: Active Contours without edge" https://doi.org/10.54294/8jk6oy and "Level set segmentation using coupled active surfaces" https://doi.org/10.54294/23ugmy
Definition at line 54 of file itkConstrainedRegionBasedLevelSetFunctionSharedData.h.
Public Member Functions | |
virtual::itk::LightObject::Pointer | CreateAnother () const |
const char * | GetNameOfClass () const override |
void | PopulateListImage () override |
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void | AllocateListImage (const FeatureImageType *featureImage) |
void | CreateHeavisideFunctionOfLevelSetImage (const unsigned int j, const InputImageType *image) |
const char * | GetNameOfClass () const override |
void | SetFunctionCount (const unsigned int n) |
void | SetKdTree (KdTreePointer kdtree) |
void | SetNumberOfNeighbors (const unsigned int n) |
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Pointer | Clone () const |
virtual void | Delete () |
virtual int | GetReferenceCount () const |
void | Print (std::ostream &os, Indent indent=0) const |
virtual void | Register () const |
virtual void | SetReferenceCount (int) |
virtual void | UnRegister () const noexcept |
Static Public Member Functions | |
static Pointer | New () |
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static void | BreakOnError () |
static Pointer | New () |
Static Public Attributes | |
static constexpr unsigned int | ImageDimension = TFeatureImage::ImageDimension |
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static constexpr unsigned int | ImageDimension = TFeatureImage::ImageDimension |
Protected Member Functions | |
ConstrainedRegionBasedLevelSetFunctionSharedData () | |
~ConstrainedRegionBasedLevelSetFunctionSharedData () override=default | |
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RegionBasedLevelSetFunctionSharedData () | |
~RegionBasedLevelSetFunctionSharedData () override=default | |
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virtual LightObject::Pointer | InternalClone () const |
LightObject () | |
virtual void | PrintHeader (std::ostream &os, Indent indent) const |
virtual void | PrintSelf (std::ostream &os, Indent indent) const |
virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
virtual | ~LightObject () |
Additional Inherited Members | |
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unsigned int | m_FunctionCount {} |
KdTreePointer | m_KdTree {} |
LevelSetDataPointerVector | m_LevelSetDataPointerVector {} |
ListImagePointer | m_NearestNeighborListImage {} |
unsigned int | m_NumberOfNeighbors { 6 } |
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std::atomic< int > | m_ReferenceCount {} |
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::CentroidVectorType |
Definition at line 111 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ConstPointer = SmartPointer<const Self> |
Definition at line 63 of file itkConstrainedRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureImageConstPointer |
Definition at line 89 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureImagePointer |
Definition at line 88 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureImageType = TFeatureImage |
Definition at line 84 of file itkConstrainedRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureIndexType |
Definition at line 95 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeaturePixelType |
Definition at line 90 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeaturePointType |
Definition at line 96 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureRegionType |
Definition at line 91 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureSizeType |
Definition at line 92 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureSizeValueType |
Definition at line 93 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureSpacingType |
Definition at line 94 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputImageConstPointer |
Definition at line 77 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputImagePointer |
Definition at line 76 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputImageType = TInputImage |
Definition at line 72 of file itkConstrainedRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputIndexType |
Definition at line 83 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputIndexValueType |
Definition at line 84 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputPixelType |
Definition at line 78 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputPointType |
Definition at line 85 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputRegionType |
Definition at line 79 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputSizeType |
Definition at line 80 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputSizeValueType |
Definition at line 81 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputSpacingType |
Definition at line 82 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::KdTreePointer |
Definition at line 116 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::LevelSetDataPointer |
Definition at line 119 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::LevelSetDataPointerVector |
Definition at line 120 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::LevelSetDataPointerVectorIterator |
Definition at line 121 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::LevelSetDataType = TSingleData |
Definition at line 115 of file itkConstrainedRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListImageConstPointer |
Definition at line 101 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListImagePointer |
Definition at line 100 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListImageType |
Definition at line 99 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListIndexType |
Definition at line 106 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListIndexValueType |
Definition at line 107 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListIteratorType |
Definition at line 109 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListPixelType |
Definition at line 98 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListPointType |
Definition at line 108 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListRegionType |
Definition at line 102 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListSizeType |
Definition at line 103 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListSizeValueType |
Definition at line 104 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ListSpacingType |
Definition at line 105 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Pointer = SmartPointer<Self> |
Definition at line 62 of file itkConstrainedRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::SampleType |
Definition at line 112 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Self = ConstrainedRegionBasedLevelSetFunctionSharedData |
Definition at line 60 of file itkConstrainedRegionBasedLevelSetFunctionSharedData.h.
using itk::ConstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Superclass = RegionBasedLevelSetFunctionSharedData<TInputImage, TFeatureImage, TSingleData> |
Definition at line 61 of file itkConstrainedRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::TreeGeneratorType |
Definition at line 113 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::TreePointer |
Definition at line 114 of file itkRegionBasedLevelSetFunctionSharedData.h.
using itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::TreeType |
Definition at line 115 of file itkRegionBasedLevelSetFunctionSharedData.h.
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inlineprotected |
Definition at line 174 of file itkConstrainedRegionBasedLevelSetFunctionSharedData.h.
Referenced by GetNameOfClass().
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overrideprotecteddefault |
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virtual |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
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overridevirtual |
Return the name of this class as a string. Used by the object factory (implemented in New()) to instantiate objects of a named type. Also used for debugging and other output information.
Reimplemented from itk::LightObject.
References ConstrainedRegionBasedLevelSetFunctionSharedData().
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static |
Method for creation through the object factory.
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inlineoverridevirtual |
Implements itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >.
Definition at line 121 of file itkConstrainedRegionBasedLevelSetFunctionSharedData.h.
References itk::ImageConstIteratorWithIndex< TImage >::GetIndex(), itk::ImageConstIteratorWithIndex< TImage >::GoToBegin(), ImageDimension, itk::ImageConstIteratorWithIndex< TImage >::IsAtEnd(), itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_FunctionCount, itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_KdTree, itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_LevelSetDataPointerVector, itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_NearestNeighborListImage, itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_NumberOfNeighbors, and itk::ImageRegionIteratorWithIndex< TImage >::Set().
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staticconstexpr |
Definition at line 65 of file itkConstrainedRegionBasedLevelSetFunctionSharedData.h.
Referenced by PopulateListImage().