ITK
6.0.0
Insight Toolkit
|
#include <itkShapeLabelMapFilter.h>
The valuator class for the ShapeLabelObject.
ShapeLabelMapFilter can be used to set the attributes values of the ShapeLabelObject in a LabelMap.
ShapeLabelMapFilter takes an optional parameter, used only to optimize the computation time and the memory usage when the perimeter or the feret diameter is used: the exact copy of the input LabelMap is stored in an Image. It can be set with SetLabelImage(). It is cleared at the end of the computation, so must be reset before running Update() again. It is not part of the pipeline management design, to let the subclasses of ShapeLabelMapFilter use the pipeline design to specify truly required inputs.
This implementation was taken from the Insight Journal paper: https://doi.org/10.54294/q6auw4
Definition at line 53 of file itkShapeLabelMapFilter.h.
Public Types | |
using | ConstPointer = SmartPointer< const Self > |
using | ImageConstPointer = typename ImageType::ConstPointer |
using | ImagePointer = typename ImageType::Pointer |
using | ImageType = TImage |
using | IndexType = typename ImageType::IndexType |
using | LabelImageConstPointer = typename LabelImageType::ConstPointer |
using | LabelImagePointer = typename LabelImageType::Pointer |
using | LabelImageType = TLabelImage |
using | LabelObjectType = typename ImageType::LabelObjectType |
using | LabelPixelType = typename LabelImageType::PixelType |
using | MatrixType = typename LabelObjectType::MatrixType |
using | OffsetType = typename ImageType::OffsetType |
using | PixelType = typename ImageType::PixelType |
using | Pointer = SmartPointer< Self > |
using | RegionType = typename ImageType::RegionType |
using | Self = ShapeLabelMapFilter |
using | SizeType = typename ImageType::SizeType |
using | Superclass = InPlaceLabelMapFilter< TImage > |
using | VectorType = typename LabelObjectType::VectorType |
Public Types inherited from itk::InPlaceLabelMapFilter< TImage > | |
using | ConstPointer = SmartPointer< const Self > |
using | IndexType = typename InputImageType::IndexType |
using | InputImageConstPointer = typename InputImageType::ConstPointer |
using | InputImagePixelType = typename InputImageType::PixelType |
using | InputImagePointer = typename InputImageType::Pointer |
using | InputImageRegionType = typename InputImageType::RegionType |
using | InputImageType = TImage |
using | LabelObjectType = typename InputImageType::LabelObjectType |
using | PixelType = typename InputImageType::PixelType |
using | Pointer = SmartPointer< Self > |
using | RegionType = typename InputImageType::RegionType |
using | Self = InPlaceLabelMapFilter |
using | Superclass = LabelMapFilter< TImage, TImage > |
using | TOutputImage = TImage |
Public Types inherited from itk::LabelMapFilter< TImage, TImage > | |
using | ConstPointer = SmartPointer< const Self > |
using | LabelObjectType = typename InputImageType::LabelObjectType |
using | OutputImageConstPointer = typename OutputImageType::ConstPointer |
using | OutputImagePixelType = typename OutputImageType::PixelType |
using | OutputImagePointer = typename OutputImageType::Pointer |
using | OutputImageRegionType = typename OutputImageType::RegionType |
using | OutputImageType = TImage |
using | Pointer = SmartPointer< Self > |
using | Self = LabelMapFilter |
using | Superclass = ImageToImageFilter< TImage, TImage > |
Public Types inherited from itk::ImageToImageFilter< TImage, TImage > | |
using | ConstPointer = SmartPointer< const Self > |
using | InputImageConstPointer = typename InputImageType::ConstPointer |
using | InputImagePixelType = typename InputImageType::PixelType |
using | InputImagePointer = typename InputImageType::Pointer |
using | InputImageRegionType = typename InputImageType::RegionType |
using | InputImageType = TImage |
using | Pointer = SmartPointer< Self > |
using | Self = ImageToImageFilter |
using | Superclass = ImageSource< TImage > |
Public Types inherited from itk::ImageSource< TImage > | |
using | ConstPointer = SmartPointer< const Self > |
using | DataObjectIdentifierType = Superclass::DataObjectIdentifierType |
using | DataObjectPointer = DataObject::Pointer |
using | DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType |
using | OutputImagePixelType = typename OutputImageType::PixelType |
using | OutputImagePointer = typename OutputImageType::Pointer |
using | OutputImageRegionType = typename OutputImageType::RegionType |
using | OutputImageType = TImage |
using | Pointer = SmartPointer< Self > |
using | Self = ImageSource |
using | Superclass = ProcessObject |
Public Types inherited from itk::ProcessObject | |
using | ConstPointer = SmartPointer< const Self > |
using | DataObjectIdentifierType = DataObject::DataObjectIdentifierType |
using | DataObjectPointer = DataObject::Pointer |
using | DataObjectPointerArray = std::vector< DataObjectPointer > |
using | DataObjectPointerArraySizeType = DataObjectPointerArray::size_type |
using | MultiThreaderType = MultiThreaderBase |
using | NameArray = std::vector< DataObjectIdentifierType > |
using | Pointer = SmartPointer< Self > |
using | Self = ProcessObject |
using | Superclass = Object |
Public Types inherited from itk::Object | |
using | ConstPointer = SmartPointer< const Self > |
using | Pointer = SmartPointer< Self > |
using | Self = Object |
using | Superclass = LightObject |
Public Types inherited from itk::LightObject | |
using | ConstPointer = SmartPointer< const Self > |
using | Pointer = SmartPointer< Self > |
using | Self = LightObject |
Static Public Member Functions | |
static Pointer | New () |
Static Public Member Functions inherited from itk::InPlaceLabelMapFilter< TImage > | |
static Pointer | New () |
Static Public Member Functions inherited from itk::LabelMapFilter< TImage, TImage > | |
static Pointer | New () |
Static Public Member Functions inherited from itk::ImageToImageFilter< TImage, TImage > | |
static double | GetGlobalDefaultCoordinateTolerance () |
static double | GetGlobalDefaultDirectionTolerance () |
static void | SetGlobalDefaultCoordinateTolerance (double) |
static void | SetGlobalDefaultDirectionTolerance (double) |
Static Public Member Functions inherited from itk::Object | |
static bool | GetGlobalWarningDisplay () |
static void | GlobalWarningDisplayOff () |
static void | GlobalWarningDisplayOn () |
static Pointer | New () |
static void | SetGlobalWarningDisplay (bool val) |
Static Public Member Functions inherited from itk::LightObject | |
static void | BreakOnError () |
static Pointer | New () |
Static Public Attributes | |
static constexpr unsigned int | ImageDimension = TImage::ImageDimension |
Static Public Attributes inherited from itk::InPlaceLabelMapFilter< TImage > | |
static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | OutputImageDimension |
Static Public Attributes inherited from itk::LabelMapFilter< TImage, TImage > | |
static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | OutputImageDimension |
Static Public Attributes inherited from itk::ImageToImageFilter< TImage, TImage > | |
static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | OutputImageDimension |
Static Public Attributes inherited from itk::ImageSource< TImage > | |
static constexpr unsigned int | OutputImageDimension |
Private Types | |
using | MapIntercept2Type = std::map< Offset2Type, SizeValueType, Functor::LexicographicCompare > |
using | MapIntercept3Type = std::map< Offset3Type, SizeValueType, Functor::LexicographicCompare > |
using | Offset2Type = itk::Offset< 2 > |
using | Offset3Type = itk::Offset< 3 > |
using | Spacing2Type = itk::Vector< double, 2 > |
using | Spacing3Type = itk::Vector< double, 3 > |
Private Member Functions | |
void | ComputeFeretDiameter (LabelObjectType *labelObject) |
void | ComputeOrientedBoundingBox (LabelObjectType *labelObject) |
void | ComputePerimeter (LabelObjectType *labelObject) |
double | PerimeterFromInterceptCount (MapIntercept2Type &intercepts, const Spacing2Type spacing) |
double | PerimeterFromInterceptCount (MapIntercept3Type &intercepts, const Spacing3Type spacing) |
template<typename TMapIntercept , typename TSpacing > | |
double | PerimeterFromInterceptCount (TMapIntercept &intercepts, const TSpacing &spacing) |
Private Attributes | |
bool | m_ComputeFeretDiameter {} |
bool | m_ComputeOrientedBoundingBox {} |
bool | m_ComputePerimeter {} |
LabelImageConstPointer | m_LabelImage {} |
Additional Inherited Members | |
Protected Types inherited from itk::ImageToImageFilter< TImage, TImage > | |
using | InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension > |
using | OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension > |
Static Protected Member Functions inherited from itk::ImageSource< TImage > | |
static const ImageRegionSplitterBase * | GetGlobalDefaultSplitter () |
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION | ThreaderCallback (void *arg) |
Static Protected Member Functions inherited from itk::ProcessObject | |
template<typename TSourceObject > | |
static void | MakeRequiredOutputs (TSourceObject &sourceObject, const DataObjectPointerArraySizeType numberOfRequiredOutputs) |
static constexpr float | progressFixedToFloat (uint32_t fixed) |
static uint32_t | progressFloatToFixed (float f) |
Protected Attributes inherited from itk::LabelMapFilter< TImage, TImage > | |
std::mutex | m_LabelObjectContainerLock |
Protected Attributes inherited from itk::ImageSource< TImage > | |
bool | m_DynamicMultiThreading |
Protected Attributes inherited from itk::ProcessObject | |
TimeStamp | m_OutputInformationMTime {} |
bool | m_Updating {} |
Protected Attributes inherited from itk::LightObject | |
std::atomic< int > | m_ReferenceCount {} |
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::ConstPointer = SmartPointer<const Self> |
Definition at line 62 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::ImageConstPointer = typename ImageType::ConstPointer |
Definition at line 67 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::ImagePointer = typename ImageType::Pointer |
Definition at line 66 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::ImageType = TImage |
Some convenient type alias.
Definition at line 65 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::IndexType = typename ImageType::IndexType |
Definition at line 69 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::LabelImageConstPointer = typename LabelImageType::ConstPointer |
Definition at line 79 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::LabelImagePointer = typename LabelImageType::Pointer |
Definition at line 78 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::LabelImageType = TLabelImage |
Definition at line 77 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::LabelObjectType = typename ImageType::LabelObjectType |
Definition at line 73 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::LabelPixelType = typename LabelImageType::PixelType |
Definition at line 80 of file itkShapeLabelMapFilter.h.
|
private |
Definition at line 170 of file itkShapeLabelMapFilter.h.
|
private |
Definition at line 171 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::MatrixType = typename LabelObjectType::MatrixType |
Definition at line 74 of file itkShapeLabelMapFilter.h.
|
private |
Definition at line 166 of file itkShapeLabelMapFilter.h.
|
private |
Definition at line 167 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::OffsetType = typename ImageType::OffsetType |
Definition at line 72 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::PixelType = typename ImageType::PixelType |
Definition at line 68 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::Pointer = SmartPointer<Self> |
Definition at line 61 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::RegionType = typename ImageType::RegionType |
Definition at line 71 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::Self = ShapeLabelMapFilter |
Standard class type aliases.
Definition at line 59 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::SizeType = typename ImageType::SizeType |
Definition at line 70 of file itkShapeLabelMapFilter.h.
|
private |
Definition at line 168 of file itkShapeLabelMapFilter.h.
|
private |
Definition at line 169 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::Superclass = InPlaceLabelMapFilter<TImage> |
Definition at line 60 of file itkShapeLabelMapFilter.h.
using itk::ShapeLabelMapFilter< TImage, TLabelImage >::VectorType = typename LabelObjectType::VectorType |
Definition at line 75 of file itkShapeLabelMapFilter.h.
|
protected |
|
overrideprotecteddefault |
|
overrideprotectedvirtual |
If an imaging filter needs to perform processing after all processing threads have completed, the filter can can provide an implementation for AfterThreadedGenerateData(). The execution flow in the default GenerateData() method will be: 1) Allocate the output buffer 2) Call BeforeThreadedGenerateData() 3) Spawn threads, calling ThreadedGenerateData() in each thread. 4) Call AfterThreadedGenerateData() Note that this flow of control is only available if a filter provides a ThreadedGenerateData() method and NOT a GenerateData() method.
Reimplemented from itk::ImageSource< TImage >.
|
overrideprotectedvirtual |
If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). The execution flow in the default GenerateData() method will be: 1) Allocate the output buffer 2) Call BeforeThreadedGenerateData() 3) Spawn threads, calling ThreadedGenerateData() in each thread. 4) Call AfterThreadedGenerateData() Note that this flow of control is only available if a filter provides a ThreadedGenerateData() method and NOT a GenerateData() method.
Reimplemented from itk::ImageSource< TImage >.
|
private |
|
virtual |
Set/Get whether the maximum Feret diameter should be computed or not. Default value is false because of the high computation time required.
|
private |
|
virtual |
Set/Get whether the oriented bounding box should be computed or not. Default value is false because of potential memory consumption issues with sparse labels.
|
private |
|
virtual |
Set/Get whether the perimeter should be computed or not. Default value is true;
|
virtual |
Set/Get whether the maximum Feret diameter should be computed or not. Default value is false because of the high computation time required.
|
virtual |
Set/Get whether the oriented bounding box should be computed or not. Default value is false because of potential memory consumption issues with sparse labels.
|
virtual |
Set/Get whether the perimeter should be computed or not. Default value is true;
|
overridevirtual |
Reimplemented from itk::ProcessObject.
|
static |
Standard New method.
|
private |
|
private |
|
private |
|
overrideprotectedvirtual |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::ProcessObject.
|
virtual |
Set/Get whether the maximum Feret diameter should be computed or not. Default value is false because of the high computation time required.
|
virtual |
Set/Get whether the oriented bounding box should be computed or not. Default value is false because of potential memory consumption issues with sparse labels.
|
virtual |
Set/Get whether the perimeter should be computed or not. Default value is true;
|
inline |
Set the label image
Definition at line 132 of file itkShapeLabelMapFilter.h.
|
overrideprotected |
|
staticconstexpr |
ImageDimension constants
Definition at line 83 of file itkShapeLabelMapFilter.h.
|
private |
Definition at line 154 of file itkShapeLabelMapFilter.h.
|
private |
Definition at line 156 of file itkShapeLabelMapFilter.h.
|
private |
Definition at line 155 of file itkShapeLabelMapFilter.h.
|
private |
Definition at line 157 of file itkShapeLabelMapFilter.h.