#include <itkShapePriorMAPCostFunction.h>

Detailed Description

template<typename TFeatureImage, typename TOutputPixel>
class itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >

Represents the maximum aprior (MAP) cost function used ShapePriorSegmentationLevelSetImageFilter to estimate the shape parameters.

This class follows the shape and pose parameters estimation developed in [1]. Note that this class returns the negative log of the MAP function. Using the negative function make this cost function compatible with generic optimizers which seeks the minimum of a cost function.

This class has two template parameters, the feature image type representing the edge potential map and the pixel type used to represent the output level set in the ShapePriorSegmentationLevelSetImageFilter.

See also: ShapePriorSegmentationLevelSetImageFilter

REFERENCES

: [1] Leventon, M.E. et al. "Statistical Shape Influence in Geodesic Active Contours", CVPR 2000.

Definition at line 50 of file itkShapePriorMAPCostFunction.h.

Inheritance diagram for itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >:

Collaboration diagram for itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >:

Public Types
using	ArrayType = Array< double >

using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = ShapePriorMAPCostFunction

using	Superclass = ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >

Public Types inherited from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >
using	ConstPointer = SmartPointer< const Self >

using	FeatureImagePointer = typename FeatureImageType::ConstPointer

using	FeatureImageType = TFeatureImage

using	NodeContainerPointer = typename NodeContainerType::ConstPointer

using	NodeContainerType = VectorContainer< unsigned int, NodeType >

using	NodeType = LevelSetNode< PixelType, Self::ImageDimension >

using	PixelType = TOutputPixel

using	Pointer = SmartPointer< Self >

using	Self = ShapePriorMAPCostFunctionBase

using	ShapeFunctionPointer = typename ShapeFunctionType::Pointer

using	ShapeFunctionType = ShapeSignedDistanceFunction< double, Self::ImageDimension >

using	Superclass = SingleValuedCostFunction

Public Types inherited from itk::SingleValuedCostFunction
using	ConstPointer = SmartPointer< const Self >

using	DerivativeType = Array< ParametersValueType >

using	MeasureType = double

using	ParametersType = Superclass::ParametersType

using	ParametersValueType = Superclass::ParametersValueType

using	Pointer = SmartPointer< Self >

using	Self = SingleValuedCostFunction

using	Superclass = CostFunction

Public Types inherited from itk::CostFunctionTemplate< double >
using	ConstPointer = SmartPointer< const Self >

using	ParametersType = OptimizerParameters< double >

using	ParametersValueType = double

using	Pointer = SmartPointer< Self >

using	Self = CostFunctionTemplate

using	Superclass = Object

Public Types inherited from itk::Object
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = Object

using	Superclass = LightObject

Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = LightObject

Public Member Functions
MeasureType	ComputeLogGradientTerm (const ParametersType &parameters) const override

MeasureType	ComputeLogInsideTerm (const ParametersType &parameters) const override

MeasureType	ComputeLogPosePriorTerm (const ParametersType &parameters) const override

MeasureType	ComputeLogShapePriorTerm (const ParametersType &parameters) const override

const char *	GetNameOfClass () const override

void	Initialize () override


virtual void	SetShapeParameterMeans (ArrayType _arg)

virtual ArrayType	GetShapeParameterMeans () const


virtual void	SetShapeParameterStandardDeviations (ArrayType _arg)

virtual ArrayType	GetShapeParameterStandardDeviations () const

Public Member Functions inherited from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >
virtual MeasureType	ComputeLogGradientTerm (const ParametersType &) const =0

virtual MeasureType	ComputeLogInsideTerm (const ParametersType &) const =0

virtual MeasureType	ComputeLogPosePriorTerm (const ParametersType &) const =0

virtual MeasureType	ComputeLogShapePriorTerm (const ParametersType &) const =0

void	GetDerivative (const ParametersType &, DerivativeType &) const override

const char *	GetNameOfClass () const override

unsigned int	GetNumberOfParameters () const override

MeasureType	GetValue (const ParametersType &parameters) const override

virtual void	Initialize ()

virtual void	SetShapeFunction (ShapeFunctionType *_arg)

virtual ShapeFunctionType *	GetModifiableShapeFunction ()

virtual void	SetActiveRegion (const NodeContainerType *_arg)

virtual const NodeContainerType *	GetActiveRegion () const

virtual void	SetFeatureImage (const FeatureImageType *_arg)

virtual const FeatureImageType *	GetFeatureImage () const

Public Member Functions inherited from itk::SingleValuedCostFunction
virtual void	GetDerivative (const ParametersType &parameters, DerivativeType &derivative) const =0

const char *	GetNameOfClass () const override

virtual MeasureType	GetValue (const ParametersType &parameters) const =0

virtual void	GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const

Public Member Functions inherited from itk::CostFunctionTemplate< double >
const char *	GetNameOfClass () const override

virtual unsigned int	GetNumberOfParameters () const=0

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *cmd) const

unsigned long	AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const

LightObject::Pointer	CreateAnother () const override

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary ()

const MetaDataDictionary &	GetMetaDataDictionary () const

virtual ModifiedTimeType	GetMTime () const

const char *	GetNameOfClass () const override

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

void	Register () const override

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag) const

void	SetDebug (bool debugFlag) const

void	SetReferenceCount (int) override

void	UnRegister () const noexcept override

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

void	SetMetaDataDictionary (MetaDataDictionary &&rrhs)

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
Pointer	Clone () const

virtual Pointer	CreateAnother () const

virtual void	Delete ()

virtual const char *	GetNameOfClass () const

virtual int	GetReferenceCount () const

void	Print (std::ostream &os, Indent indent=0) const

virtual void	Register () const

virtual void	SetReferenceCount (int)

virtual void	UnRegister () const noexcept

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool val)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Static Public Attributes
static constexpr unsigned int	ImageDimension = TFeatureImage::ImageDimension

Static Public Attributes inherited from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >
static constexpr unsigned int	ImageDimension = TFeatureImage::ImageDimension

Protected Member Functions
void	PrintSelf (std::ostream &os, Indent indent) const override

	ShapePriorMAPCostFunction ()

	~ShapePriorMAPCostFunction () override=default

Protected Member Functions inherited from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >
void	PrintSelf (std::ostream &os, Indent indent) const override

	ShapePriorMAPCostFunctionBase ()

	~ShapePriorMAPCostFunctionBase () override=default

Protected Member Functions inherited from itk::SingleValuedCostFunction
	SingleValuedCostFunction ()=default

	~SingleValuedCostFunction () override

Protected Member Functions inherited from itk::CostFunctionTemplate< double >
	CostFunctionTemplate ()=default

void	PrintSelf (std::ostream &os, Indent indent) const override

	~CostFunctionTemplate () override=default

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	SetTimeStamp (const TimeStamp &timeStamp)

	~Object () override

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintSelf (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Private Attributes
GaussianKernelFunction< double >::Pointer	m_GaussianFunction {}

ArrayType	m_ShapeParameterMeans {}

ArrayType	m_ShapeParameterStandardDeviations {}

WeightsType	m_Weights {}

using	WeightsType = FixedArray< double, 4 >

virtual void	SetWeights (WeightsType _arg)

virtual const WeightsType &	GetWeights () const

Additional Inherited Members
Protected Attributes inherited from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >
NodeContainerPointer	m_ActiveRegion {}

FeatureImagePointer	m_FeatureImage {}

ShapeFunctionPointer	m_ShapeFunction {}

Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount {}