itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData > Class Template Reference

#include <itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h>

Detailed Description

template<typename TInputImage, typename TFeatureImage, typename TSingleData>
class itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >

Helper class used to share data in the ScalarChanAndVeseLevelSetFunction.

This class holds cache data used during the computation of the LevelSet updates.

Based on the paper:

   "An active contour model without edges"
    T. Chan and L. Vese.
    In Scale-Space Theories in Computer Vision, pages 141-151, 1999.

Author

Mosaliganti K., Smith B., Gelas A., Gouaillard A., Megason S.

This code was taken from the Insight Journal paper:

"Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes"
https://doi.org/10.54294/wvwmf8

That is based on the papers:

"Level Set Segmentation: Active Contours without edge"
https://doi.org/10.54294/8jk6oy

and

"Level set segmentation using coupled active surfaces"
https://doi.org/10.54294/23ugmy

Definition at line 58 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

Inheritance diagram for itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >:

Collaboration diagram for itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >:

Public Types
using	ConstPointer = SmartPointer< const Self >
using	FeatureImageType = TFeatureImage
using	InputImageType = TInputImage
using	LevelSetDataType = TSingleData
using	Pointer = SmartPointer< Self >
using	Self = UnconstrainedRegionBasedLevelSetFunctionSharedData
using	Superclass = RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >
Public Types inherited from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >
using	CentroidVectorType = Vector< float, Self::ImageDimension >
using	ConstPointer = SmartPointer< const Self >
using	FeatureImageConstPointer = typename FeatureImageType::ConstPointer
using	FeatureImagePointer = typename FeatureImageType::Pointer
using	FeatureImageType = TFeatureImage
using	FeatureIndexType = typename FeatureImageType::IndexType
using	FeaturePixelType = typename FeatureImageType::PixelType
using	FeaturePointType = typename FeatureImageType::PointType
using	FeatureRegionType = typename FeatureImageType::RegionType
using	FeatureSizeType = typename FeatureImageType::SizeType
using	FeatureSizeValueType = typename FeatureSizeType::SizeValueType
using	FeatureSpacingType = typename FeatureImageType::SpacingType
using	InputImageConstPointer = typename InputImageType::ConstPointer
using	InputImagePointer = typename InputImageType::Pointer
using	InputImageType = TInputImage
using	InputIndexType = typename InputImageType::IndexType
using	InputIndexValueType = typename InputIndexType::IndexValueType
using	InputPixelType = typename InputImageType::PixelType
using	InputPointType = typename InputImageType::PointType
using	InputRegionType = typename InputImageType::RegionType
using	InputSizeType = typename InputImageType::SizeType
using	InputSizeValueType = typename InputSizeType::SizeValueType
using	InputSpacingType = typename InputImageType::SpacingType
using	KdTreePointer = typename TreeType::Pointer
using	LevelSetDataPointer = typename LevelSetDataType::Pointer
using	LevelSetDataPointerVector = std::vector< LevelSetDataPointer >
using	LevelSetDataPointerVectorIterator = typename LevelSetDataPointerVector::iterator
using	LevelSetDataType = TSingleData
using	ListImageConstPointer = typename ListImageType::ConstPointer
using	ListImagePointer = typename ListImageType::Pointer
using	ListImageType = Image< ListPixelType, Self::ImageDimension >
using	ListIndexType = typename ListImageType::IndexType
using	ListIndexValueType = typename ListIndexType::IndexValueType
using	ListIteratorType = ImageRegionIteratorWithIndex< ListImageType >
using	ListPixelType = std::list< unsigned int >
using	ListPointType = typename ListImageType::PointType
using	ListRegionType = typename ListImageType::RegionType
using	ListSizeType = typename ListImageType::SizeType
using	ListSizeValueType = typename ListSizeType::SizeValueType
using	ListSpacingType = typename ListImageType::SpacingType
using	Pointer = SmartPointer< Self >
using	SampleType = itk::Statistics::ListSample< CentroidVectorType >
using	Self = RegionBasedLevelSetFunctionSharedData
using	Superclass = LightObject
using	TreeGeneratorType = itk::Statistics::KdTreeGenerator< SampleType >
using	TreePointer = typename TreeGeneratorType::Pointer
using	TreeType = typename TreeGeneratorType::KdTreeType
Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >
using	Pointer = SmartPointer< Self >
using	Self = LightObject

Public Member Functions
const char *	GetNameOfClass () const override
void	PopulateListImage () override
Public Member Functions inherited from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >
void	AllocateListImage (const FeatureImageType *featureImage)
void	CreateHeavisideFunctionOfLevelSetImage (const unsigned int j, const InputImageType *image)
const char *	GetNameOfClass () const override
virtual void	PopulateListImage ()=0
void	SetFunctionCount (const unsigned int n)
void	SetKdTree (KdTreePointer kdtree)
void	SetNumberOfNeighbors (const unsigned int n)
Public Member Functions inherited from itk::LightObject
Pointer	Clone () const
virtual Pointer	CreateAnother () const
virtual void	Delete ()
virtual const char *	GetNameOfClass () const
virtual int	GetReferenceCount () const
void	Print (std::ostream &os, Indent indent=0) const
virtual void	Register () const
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const noexcept

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()
static Pointer	New ()

Static Public Attributes
static constexpr unsigned int	ImageDimension = TFeatureImage::ImageDimension
Static Public Attributes inherited from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >
static constexpr unsigned int	ImageDimension = TFeatureImage::ImageDimension

Protected Member Functions
	UnconstrainedRegionBasedLevelSetFunctionSharedData ()
	~UnconstrainedRegionBasedLevelSetFunctionSharedData () override=default
Protected Member Functions inherited from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >
	RegionBasedLevelSetFunctionSharedData ()
	~RegionBasedLevelSetFunctionSharedData () override=default
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Additional Inherited Members
Public Attributes inherited from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >
unsigned int	m_FunctionCount {}
KdTreePointer	m_KdTree {}
LevelSetDataPointerVector	m_LevelSetDataPointerVector {}
ListImagePointer	m_NearestNeighborListImage {}
unsigned int	m_NumberOfNeighbors { 6 }
Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount {}

Member Typedef Documentation

ConstPointer

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ConstPointer = SmartPointer<const Self>

Definition at line 67 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

FeatureImageType

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::FeatureImageType = TFeatureImage

Definition at line 88 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

InputImageType

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::InputImageType = TInputImage

Definition at line 76 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

LevelSetDataType

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::LevelSetDataType = TSingleData

Definition at line 119 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

Pointer

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Pointer = SmartPointer<Self>

Definition at line 66 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

Self

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Self = UnconstrainedRegionBasedLevelSetFunctionSharedData

Definition at line 64 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

Superclass

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

using itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::Superclass = RegionBasedLevelSetFunctionSharedData<TInputImage, TFeatureImage, TSingleData>

Definition at line 65 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

Constructor & Destructor Documentation

UnconstrainedRegionBasedLevelSetFunctionSharedData()

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::UnconstrainedRegionBasedLevelSetFunctionSharedData ( )

inlineprotected

Definition at line 137 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

~UnconstrainedRegionBasedLevelSetFunctionSharedData()

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::~UnconstrainedRegionBasedLevelSetFunctionSharedData ( )

overrideprotecteddefault

Member Function Documentation

GetNameOfClass()

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

const char * itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::GetNameOfClass ( ) const

overridevirtual

Return the name of this class as a string. Used by the object factory (implemented in New()) to instantiate objects of a named type. Also used for debugging and other output information.

Reimplemented from itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >.

New()

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

static Pointer itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::New ( )

static

Method for creation through the object factory.

PopulateListImage()

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

void itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::PopulateListImage ( )

inlineoverridevirtual

Implements itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >.

Definition at line 125 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

References itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_FunctionCount, and itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::m_NearestNeighborListImage.

Member Data Documentation

ImageDimension

template<typename TInputImage , typename TFeatureImage , typename TSingleData >

constexpr unsigned int itk::UnconstrainedRegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::ImageDimension = TFeatureImage::ImageDimension

staticconstexpr

Definition at line 69 of file itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h.

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The documentation for this class was generated from the following file:

• itkUnconstrainedRegionBasedLevelSetFunctionSharedData.h